Agustinus Murdjoko

Bio: Agustinus Murdjoko is an academic researcher from State University of Papua. The author has contributed to research in topics: Population & Species richness. The author has an hindex of 4, co-authored 14 publications receiving 54 citations.

Opportunities and challenges for an Indonesian forest monitoring network

Abstract: Permanent sampling plots (PSPs) are a powerful and reliable methodology to help our understanding of the diversity and dynamics of tropical forests. Based on the current inventory of PSPs in Indonesia, there is high potential to establish a long-term collaborative forest monitoring network. Whilst there are challenges to initiating such a network, there are also innumerable benefits to help us understand and better conserve these exceptionally diverse ecosystems.

Plant Species Composition and Their Conspecific Association in Natural Tropical Rainforest, South Papua

Abstract: Papua has so many wide lowland areas that cover high diversity in plant from life-forms. In contrast, there is a lack of information concerning species diversity. The objectives of the research were to describe species of plant life-forms and described conspecific associations between small individuals and large individuals in natural tropical rainforest, south Papua. Then, 46 nested plots were placed systematically in natural tropical rainforest of Boven Digoel Regency, Papua. Density, frequency, dominance and importance value index (IVI) were analyzed to describe plant diversity, while detrended correspondence analysis (DCA) was to describe conspecific association between small individuals and large individuals. Results found 2040 individuals in this forest consisting 194 plant species. Those are from pteridophytes, angiosperms and gymnosperms. The plant life-forms are herbs, orchids, palms, pandans, shrubs, rattans, vines and trees in which of the plant life-forms, trees are the most abundant according to number of species. In the dominant plant species, two types of conspecific association occurred between small individuals and large individuals. Analysis of DCA revealed that three are large plant species grow along with their small individuals. Another type is that small individuals grow far from their large individuals.

Co-limitation towards lower latitudes shapes global forest diversity gradients

Abstract: The latitudinal diversity gradient (LDG) is one of the most recognized global patterns of species richness exhibited across a wide range of taxa. Numerous hypotheses have been proposed in the past two centuries to explain LDG, but rigorous tests of the drivers of LDGs have been limited by a lack of high-quality global species richness data. Here we produce a high-resolution (0.025° × 0.025°) map of local tree species richness using a global forest inventory database with individual tree information and local biophysical characteristics from ~1.3 million sample plots. We then quantify drivers of local tree species richness patterns across latitudes. Generally, annual mean temperature was a dominant predictor of tree species richness, which is most consistent with the metabolic theory of biodiversity (MTB). However, MTB underestimated LDG in the tropics, where high species richness was also moderated by topographic, soil and anthropogenic factors operating at local scales. Given that local landscape variables operate synergistically with bioclimatic factors in shaping the global LDG pattern, we suggest that MTB be extended to account for co-limitation by subordinate drivers. Examining drivers of the latitudinal biodiversity gradient in a global database of local tree species richness, the authors show that co-limitation by multiple environmental and anthropogenic factors causes steeper increases in richness with latitude in tropical versus temperate and boreal zones.

Tree Association with Pometia and its Structure in Logging Concession of South Papua Forest

Abstract: Part of forests in Papua is still as logging concession. Pometia is one of target species, but there is still a lack of information regarding the ecological condition of this species. Thus, the objectives of this research were to describe what tree species (small and large individuals) associated with Pometia, how logging and soil properties influence the association and to analyze the structure of Pometia in term of diameter distribution. Canonical correspondence analysis (CCA) was applied to describe the association and its relationship with environmental factors (soil and litterfall). The results showed that association of small and large individuals of trees with both Pometia showed a different pattern in which the small individuals had a positive association and had certain tree species as a community. This association resulted from logging activity leading to the change in ecological conditions. Conversely, the association between large tree species with Pometia acuminata Radlk. and Pometia pinnata J. R. Forst. & G.Forst. showed negative pattern and tree species correlated with both Pometia were different. Of environmental factors, only C content of litterfall had a positive correlation with large Pometia acuminata and its community. Furthermore, the small individuals of Pometia were dynamic as a response to logging in which a number of the small individuals of Pometia tended to increase after logging.

Population Dynamics of Pometia for The Period of Post-Selective Logging in Tropical Rainforest, Southern Papua, Indonesia

Abstract: Tropical rainforest changed in term of structure, composition and population, resulting from logging. One of target trees during logging is Pometia . Our goals of this research were to answer that (1) How were survival, growth, fecundity and population growth rate (λ) of Pometia within remnant stands?; (2) what were driving factors to explain population dynamics of Pometia within logged forest?. Data were derived from three hectares-permanent sample plot (PSP) in logged forest of PT Tunas Timber Lestari. Integral Projection Models (IPMs) were applied to analyze population dynamics. The study showed dynamically that probability of the individuals of Pometia survived in this area did not significantly differ among their size, while stands showed the significant difference between small and large individuals. The growth of both individuals of Pometia and stands varied significantly in different size. The probability of fecundity both Pometia and stands were significantly different among size. The population of Pometia has been increasing for about a decade as the population of all stands was growing as well. Moreover, the regular documentation of species composition and structure before and after logging is necessary as a control of biodiversity. Therefore, a proper protocol to monitor the biodiversity should be designed by government and disseminated it to logging companies. How to Cite Murdjoko, A., Marsono, D., Sadono, R. & Hadisusanto, S. (2016). Population Dynamics of Pometia for The Period of Post-Selective Logging in Tropical Rainforest, Southern Papua, Indonesia. Biosaintifika: Journal of Biology & Biology Education , 8(3), 321-330.

What Drives Academic Data Sharing

Abstract: Despite widespread support from policy makers, funding agencies, and scientific journals, academic researchers rarely make their research data available to others. At the same time, data sharing in research is attributed a vast potential for scientific progress. It allows the reproducibility of study results and the reuse of old data for new research questions. Based on a systematic review of 98 scholarly papers and an empirical survey among 603 secondary data users, we develop a conceptual framework that explains the process of data sharing from the primary researcher’s point of view. We show that this process can be divided into six descriptive categories: Data donor, research organization, research community, norms, data infrastructure, and data recipients. Drawing from our findings, we discuss theoretical implications regarding knowledge creation and dissemination as well as research policy measures to foster academic collaboration. We conclude that research data cannot be regarded a knowledge commons, but research policies that better incentivize data sharing are needed to improve the quality of research results and foster scientific progress.

The Tropical managed Forests Observatory: a research network addressing the future of tropical logged forests

Abstract: While attention to logging in the tropics has been increasing, studies on the long-term effects of silviculture on forest dynamics and ecology remain scare and spatially limited Indeed, most of our knowledge on tropical forests arise from studies carried out in undisturbed tropical forests This bias is problematic given that logged and disturbed tropical forests are covering now a larger area than the so-called primary forests The Tropical managed Forests Observatory (TmFO), a new network of permanent sample plots in logged forests, aims to fill this gap by providing unprecedented opportunities to examine long-term data on the resilience of logged tropical forests at regional and global scales TmFO currently includes 24 experimental sites distributed across three tropical regions, with a total of 536 pem1anent plots and about 1200 ha of forest inventories In this paper we will present the main results generated by the network on the impact of logging on Carbon and timber recovery, as well as biodiversity changes in the Amazon basin and South East Asia

Species richness, forest structure, and functional diversity during succession in the New Guinea lowlands

Abstract: Much of the world’s tropical forests have been affected by anthropogenic disturbance. These forests are important biodiversity reservoirs whose diversity, structure and function must be characterized across the successional sequence. We examined changes in structure and diversity along a successional gradient in the lowlands of New Guinea. To do this, we measured and identified all stems ≥5 cm diameter in 19 0.25 ha plots ranging in age from 3 to >50 yr since disturbance. We also measured plant functional traits related to establishment, performance, and competitive ability. In addition, we examined change in forest structure, composition, species diversity, and functional diversity through succession. By using rarefaction to estimate functional diversity, we compared changes in functional diversity while controlling for associated differences in stem and species density. Basal area and species density increased with stand age while stem density was highest in intermediate secondary forests. Species composition differed strongly between mature and secondary forests. As forests increased in basal area, community-weighted mean wood density and foliar carbon increased, whereas specific leaf area and proportion of stems with exudate decreased. Foliar nitrogen peaked in medium-aged forests. Functional diversity was highest in mature forests, even after accounting for differences in stem and species diversity. Our study represents one of the first attempts to document successional changes in New Guinea’s lowland forest. We found robust evidence that as succession proceeds, communities occupy a greater range of functional trait space even after controlling for stem and species density. High functional diversity is important for ecological resiliency in the face of global change.

Variasi kromosom familia Rutaceae di Indonesia

Abstract: Abstrak: Indonesia dikenal dengan kesuburan tanahnya. Berbagai jenis tanaman ditemukan di alam maupun dibudidayakan oleh masyarakat, salah satunya tanaman dari familia Rutaceae. Jumlah kromosom pada familia ini bervariasi yang menggambarkan karakteristik suatu genus. Modifikasi jumlah kromosom secara induksi arfisial mampu memproduksi spesies baru yang berpengaruh terhadap garis evolusi genus tersebut. Di sisi lian, variasi jumlah kromosom tersebut dapat dijadikan sebagai upaya perbaikan kualitas tanaman dalam rangka mengembangkan potensi dan produksi tanaman lokal.