A
Alessandro Rigano
Researcher at University of Massachusetts Medical School
Publications - 10
Citations - 49
Alessandro Rigano is an academic researcher from University of Massachusetts Medical School. The author has contributed to research in topics: Metadata & Computer science. The author has an hindex of 3, co-authored 7 publications receiving 28 citations. Previous affiliations of Alessandro Rigano include University of Massachusetts Amherst.
Papers
More filters
Posted ContentDOI
Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model.
Mathias Hammer,Maximiliaan Huisman,Alessandro Rigano,Ulrike Boehm,James J. Chambers,Nathalie Gaudreault,Alison J. North,Jaime A. Pimentel,Damir Sudar,Peter Bajcsy,Claire M. Brown,Alexander D. Corbett,Orestis Faklaris,Judith Lacoste,Alex Laude,Glyn Nelson,Roland Nitschke,Farzin Farzam,Carlas Smith,David Grunwald,Caterina Strambio-De-Castillia +20 more
TL;DR: The 4D Nucleome Initiative (4DN) and the BioImaging North America (BINA)-OME (NBO namespace) as mentioned in this paper have proposed a set of metadata specifications for light microscopy data that scale with experimental intent and with the complexity of the instrumentation and analytical requirements.
Posted ContentDOI
Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model
Mathias Hammer,Maximiliaan Huisman,Alessandro Rigano,Ulrike Boehm,James J. Chambers,Nathalie Gaudreault,Alison J. North,Jaime A. Pimentel,Damir Sudar,Peter Bajcsy,Claire M. Brown,Alexander D. Corbett,Orestis Faklaris,Judith Lacoste,Alex Laude,Glyn Nelson,Roland Nitschke,Farzin Farzam,Carlas Smith,David Grunwald,Caterina Strambio-De-Castillia +20 more
TL;DR: The 4D Nucleome Initiative (4DN) and the BioImaging North America (BINA)-OME (NBO namespace) as mentioned in this paper have proposed a set of metadata specifications for light microscopy data that scale with experimental intent and with the complexity of the instrumentation and analytical requirements.
Posted ContentDOI
Proposal for minimum information guidelines to report and reproduce results of particle tracking and motion analysis
TL;DR: The proposed Minimum Information About Particle Tracking Experiments (MIAPTE) reporting guidelines described here aim to deliver a set of rules representing the minimal information required to report and support interpretation and assessment of data arising from intracellular multiple particle tracking experiments.
Posted ContentDOI
OMEGA: a software tool for the management, analysis, and dissemination of intracellular trafficking data that incorporates motion type classification and quality control [preprint]
Alessandro Rigano,Vanni Galli,Jasmine M. Clark,Lara E. Pereira,Loris Grossi,Jeremy Luban,Raffaello Giulietti,Tiziano Leidi,Eric Hunter,Mario Valle,Ivo F. Sbalzarini,Caterina Strambio-De-Castilla +11 more
TL;DR: Open Microscopy Environment inteGrated Analysis (OMEGA), a cross-platform data management, analysis, and visualization system, for particle tracking data, with particular emphasis on results from viral and vesicular trafficking experiments is presented.
Posted ContentDOI
An algorithm-centric Monte Carlo method to empirically quantify motion type estimation uncertainty in single-particle tracking
Alessandro Rigano,Vanni Galli,Krzysztof Gonciarz,Ivo F. Sbalzarini,Caterina Strambio-De-Castillia +4 more
TL;DR: A novel, algorithmic-centric, Monte Carlo method to assess the effect of experimental parameters such as signal to noise ratio (SNR), particle detection error, trajectory length, and the diffusivity characteristics of the moving particle on the uncertainty associated with motion type classification is described.