Alison J. Edwards

Bio: Alison J. Edwards is an academic researcher from Australian Nuclear Science and Technology Organisation. The author has contributed to research in topics: Hydrogen bond & Hydride. The author has an hindex of 30, co-authored 156 publications receiving 4706 citations. Previous affiliations of Alison J. Edwards include University of Oxford & Australian National University.

Late escape from an immunodominant cytotoxic T-lymphocyte response associated with progression to AIDS.

Abstract: The precise role played by HIV-specific cytotoxic T lymphocytes (CTL) in HIV infection remains controversial Despite strong CTL responses being generated during the asymptomatic phase, the virus persists and AIDS ultimately develops It has been argued that the virus is so variable, and the virus turnover so great that escape from CTL recognition would occur continually, but so far there is limited evidence for CTL escape The opposing argument is that evidence for CTL escape is present but hard to find because multiple anti-HIV immune responses are acting simultaneously during the asymptomatic phase of infection We describe six donors who make a strong CTL response to an immunodominant HLA-B27-restricted epitope In the two donors who progressed to AIDS, CTL escape to fixation by the same mutation was observed, but only after 9-12 years of epitope stability CTL escape may play an important role in the pathogenesis of HIV infection

Cytotoxic T-cell activity antagonized by naturally occurring HIV-1 Gag variants

Abstract: Most asymptomatic individuals infected with HIV-1 have a cytotoxic T lymphocyte (CTL) response to the virus Gag proteins which can be demonstrated in vitro. Epitopes have been mapped in p17 Gag and p24 Gag restricted by HLA-B8 (p17-3 and p24-13) and -B27 (p24-14). Viruses isolated from patients who make CTL responses to these peptides vary within the genetic sequences encoding these epitopes and some mutations lead to reduction in killing activity in vitro. This was attributed to either failure of the variant epitope to bind major histocompatibility complex class I or failure of T-cell receptors to bind the presented peptide. But peptide variants of class I-restricted epitopes cause 'antagonism', that is, the presence of a variant epitope (in the form of peptide) inhibits normal lysis of targets presenting the original epitope. This mirrors similar findings in class II-restricted systems. Here we report that naturally occurring variant forms of p17-3, p24-13 and p24-14 may cause antagonism of CTL lines derived from the same individuals. The effect is present if the epitopes are derived from synthetic peptides and when they are processed from full-length proteins expressed by either recombinant vaccinia constructs or replicating HIV.

β-Diketiminate-Stabilized Magnesium(I) Dimers and Magnesium(II) Hydride Complexes: Synthesis, Characterization, Adduct Formation, and Reactivity Studies

Abstract: The preparation and characterization of a series of magnesium(II) iodide complexes incorporating beta-diketiminate ligands of varying steric bulk and denticity, namely, [(ArNCMe)(2)CH](-) (Ar=phenyl, ((Ph)Nacnac), mesityl ((Mes)Nacnac), or 2,6-diisopropylphenyl (Dipp, (Dipp)Nacnac)), [(DippNCtBu)(2)CH](-) ((tBu)Nacnac), and [(DippNCMe)(Me(2)NCH(2)CH(2)NCMe)CH](-) ((Dmeda)Nacnac) are reported The complexes [((Ph)Nacnac)MgI(OEt(2))], [((Mes)Nacnac)MgI(OEt(2))], [((Dmeda)Nacnac)MgI(OEt(2))], [((Mes)Nacnac)MgI(thf)], [((Dipp)Nacnac)MgI(thf)], [((tBu)Nacnac)MgI], and [((tBu)Nacnac)MgI(DMAP)] (DMAP=4-dimethylaminopyridine) were shown to be monomeric by X-ray crystallography In addition, the related beta-diketiminato beryllium and calcium iodide complexes, [((Mes)Nacnac)BeI] and [{((Dipp)Nacnac)CaI(OEt(2))}(2)] were prepared and crystallographically characterized The reductions of all metal(II) iodide complexes by using various reagents were attempted In two cases these reactions led to the magnesium(I) dimers, [((Mes)Nacnac)MgMg((Mes)Nacnac)] and [((tBu)Nacnac)MgMg((tBu)Nacnac)] The reduction of a 1:1 mixture of [((Dipp)Nacnac)MgI(OEt(2))] and [((Mes)Nacnac)MgI(OEt(2))] with potassium gave a low yield of the crystallographically characterized complex [((Dipp)Nacnac)Mg(mu-H)(mu-I)Mg((Mes)Nacnac)] All attempts to form beryllium(I) or calcium(I) dimers by reductions of [((Mes)Nacnac)BeI], [{((Dipp)Nacnac)CaI(OEt(2))}(2)], or [{((tBu)Nacnac)CaI(thf)}(2)] have so far been unsuccessful The further reactivity of the magnesium(I) complexes [((Mes)Nacnac)MgMg((Mes)Nacnac)] and [((tBu)Nacnac)MgMg((tBu)Nacnac)] towards a variety of Lewis bases and unsaturated organic substrates was explored These studies led to the complexes [((Mes)Nacnac)Mg(L)Mg(L)((Mes)Nacnac)] (L=THF or DMAP), [((Mes)Nacnac)Mg(mu-AdN(6)Ad)Mg((Mes)Nacnac)] (Ad=1-adamantyl), [((tBu)Nacnac)Mg(mu-AdN(6)Ad)Mg((tBu)Nacnac)], and [((Mes)Nacnac)Mg(mu-tBu(2)N(2)C(2)O(2))Mg((Mes)Nacnac)] and revealed that, in general, the reactivity of the magnesium(I) dimers is inversely proportional to their steric bulk The preparation and characterization of [((tBu)Nacnac)Mg(mu-H)(2)Mg((tBu)Nacnac)] has shown the compound to have different structural and physical properties to [((tBu)Nacnac)MgMg((tBu)Nacnac)] Treatment of the former with DMAP has given [((tBu)Nacnac)Mg(H)(DMAP)], the X-ray crystal structure of which disclosed it to be the first structurally authenticated terminal magnesium hydride complex Although attempts to prepare [((Mes)Nacnac)Mg(mu-H)(2)Mg((Mes)Nacnac)] were not successful, a neutron diffraction study of the corresponding magnesium(I) complex, [((Mes)Nacnac)MgMg((Mes)Nacnac)] confirmed that the compound is devoid of hydride ligands

Plasmonic twinned silver nanoparticles with molecular precision

Abstract: Determining the structures of nanoparticles at atomic resolution is vital to understand their structure–property correlations. Large metal nanoparticles with core diameter beyond 2 nm have, to date, eluded characterization by single-crystal X-ray analysis. Here we report the chemical syntheses and structures of two giant thiolated Ag nanoparticles containing 136 and 374 Ag atoms (that is, up to 3 nm core diameter). As the largest thiolated metal nanoparticles crystallographically determined so far, these Ag nanoparticles enter the truly metallic regime with the emergence of surface plasmon resonance. As miniatures of fivefold twinned nanostructures, these structures demonstrate a subtle distortion within fivefold twinned nanostructures of face-centred cubic metals. The Ag nanoparticles reported in this work serve as excellent models to understand the detailed structure distortion within twinned metal nanostructures and also how silver nanoparticles can span from the molecular to the metallic regime. The structure of nanoparticles strongly influences their properties. Here, the authors use single crystal X-ray diffraction to resolve the crystal structures of Ag136 and Ag374nanoparticles, enabling the observation of local structure distortion and the lower size limit of surface plasmon resonance.

Chinese Puzzle Molecule: A 15 Hydride, 28 Copper Atom Nanoball

Abstract: The syntheses of the first rhombicuboctahedral copper polyhydride complexes [Cu28(H)15(S2CNR)12]PF6 (NR=NnPr2 or aza-15-crown-5) are reported. These complexes were analyzed by single-crystal X-ray and one by neutron diffraction. The core of each copper hydride nanoparticle comprises one central interstitial hydride and eight outer-triangular-face-capping hydrides. A further six face-truncating hydrides form an unprecedented bridge between the inner and outer copper atom arrays. The irregular inner Cu4 tetrahedron is encapsulated within the Cu24 rhombicuboctahedral cage, which is further enclosed by an array of twelve dithiocarbamate ligands that subtends the truncated octahedron of 24 sulfur atoms, which is concentric with the Cu24 rhombicuboctahedron and Cu4 tetrahedron about the innermost hydride. For these compounds, an intriguing, albeit limited, H2 evolution was observed at room temperature, which is accompanied by formation of the known ion [Cu8(H)(S2CNR)6]+ upon exposure of solutions to sunlight, under mild thermolytic conditions, and on reaction with weak (or strong) acids.

Crystal structure refinement with SHELXL

Abstract: The improvements in the crystal structure refinement program SHELXL have been closely coupled with the development and increasing importance of the CIF (Crystallographic Information Framework) format for validating and archiving crystal structures. An important simplification is that now only one file in CIF format (for convenience, referred to simply as `a CIF') containing embedded reflection data and SHELXL instructions is needed for a complete structure archive; the program SHREDCIF can be used to extract the .hkl and .ins files required for further refinement with SHELXL. Recent developments in SHELXL facilitate refinement against neutron diffraction data, the treatment of H atoms, the determination of absolute structure, the input of partial structure factors and the refinement of twinned and disordered structures. SHELXL is available free to academics for the Windows, Linux and Mac OS X operating systems, and is particularly suitable for multiple-core processors.

Antiviral Actions of Interferons

Abstract: Tremendous progress has been made in understanding the molecular basis of the antiviral actions of interferons (IFNs), as well as strategies evolved by viruses to antagonize the actions of IFNs. Furthermore, advances made while elucidating the IFN system have contributed significantly to our understanding in multiple areas of virology and molecular cell biology, ranging from pathways of signal transduction to the biochemical mechanisms of transcriptional and translational control to the molecular basis of viral pathogenesis. IFNs are approved therapeutics and have moved from the basic research laboratory to the clinic. Among the IFN-induced proteins important in the antiviral actions of IFNs are the RNA-dependent protein kinase (PKR), the 2',5'-oligoadenylate synthetase (OAS) and RNase L, and the Mx protein GTPases. Double-stranded RNA plays a central role in modulating protein phosphorylation and RNA degradation catalyzed by the IFN-inducible PKR kinase and the 2'-5'-oligoadenylate-dependent RNase L, respectively, and also in RNA editing by the IFN-inducible RNA-specific adenosine deaminase (ADAR1). IFN also induces a form of inducible nitric oxide synthase (iNOS2) and the major histocompatibility complex class I and II proteins, all of which play important roles in immune response to infections. Several additional genes whose expression profiles are altered in response to IFN treatment and virus infection have been identified by microarray analyses. The availability of cDNA and genomic clones for many of the components of the IFN system, including IFN-alpha, IFN-beta, and IFN-gamma, their receptors, Jak and Stat and IRF signal transduction components, and proteins such as PKR, 2',5'-OAS, Mx, and ADAR, whose expression is regulated by IFNs, has permitted the generation of mutant proteins, cells that overexpress different forms of the proteins, and animals in which their expression has been disrupted by targeted gene disruption. The use of these IFN system reagents, both in cell culture and in whole animals, continues to provide important contributions to our understanding of the virus-host interaction and cellular antiviral response.

Atomically Precise Colloidal Metal Nanoclusters and Nanoparticles: Fundamentals and Opportunities

Abstract: Colloidal nanoparticles are being intensely pursued in current nanoscience research. Nanochemists are often frustrated by the well-known fact that no two nanoparticles are the same, which precludes the deep understanding of many fundamental properties of colloidal nanoparticles in which the total structures (core plus surface) must be known. Therefore, controlling nanoparticles with atomic precision and solving their total structures have long been major dreams for nanochemists. Recently, these goals are partially fulfilled in the case of gold nanoparticles, at least in the ultrasmall size regime (1–3 nm in diameter, often called nanoclusters). This review summarizes the major progress in the field, including the principles that permit atomically precise synthesis, new types of atomic structures, and unique physical and chemical properties of atomically precise nanoparticles, as well as exciting opportunities for nanochemists to understand very fundamental science of colloidal nanoparticles (such as the s...

Leptin stimulates fatty-acid oxidation by activating AMP-activated protein kinase.

Abstract: Leptin is a hormone secreted by adipocytes that plays a pivotal role in regulating food intake, energy expenditure and neuroendocrine function1. Leptin stimulates the oxidation of fatty acids2 and the uptake of glucose3,4, and prevents the accumulation of lipids in nonadipose tissues, which can lead to functional impairments known as “lipotoxicity”5. The signalling pathways that mediate the metabolic effects of leptin remain undefined. The 5′-AMP-activated protein kinase (AMPK) potently stimulates fatty-acid oxidation in muscle by inhibiting the activity of acetyl coenzyme A carboxylase (ACC)6,7. AMPK is a heterotrimeric enzyme that is conserved from yeast to humans and functions as a ‘fuel gauge’ to monitor the status of cellular energy6. Here we show that leptin selectively stimulates phosphorylation and activation of the α2 catalytic subunit of AMPK (α2 AMPK) in skeletal muscle, thus establishing a previously unknown signalling pathway for leptin. Early activation of AMPK occurs by leptin acting directly on muscle, whereas later activation depends on leptin functioning through the hypothalamic-sympathetic nervous system axis. In parallel with its activation of AMPK, leptin suppresses the activity of ACC, thereby stimulating the oxidation of fatty acids in muscle. Blocking AMPK activation inhibits the phosphorylation of ACC stimulated by leptin. Our data identify AMPK as a principal mediator of the effects of leptin on fatty-acid metabolism in muscle.