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Anis Djari
Researcher at University of Toulouse
Publications - 28
Citations - 2164
Anis Djari is an academic researcher from University of Toulouse. The author has contributed to research in topics: Gene & Genomics. The author has an hindex of 14, co-authored 24 publications receiving 1780 citations. Previous affiliations of Anis Djari include Institut national de la recherche agronomique.
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Journal ArticleDOI
Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle
Hans D. Daetwyler,Aurélien Capitan,Hubert Pausch,Paul Stothard,Rianne van Binsbergen,R.F. Brøndum,Xiaoping Liao,Anis Djari,Sabrina Rodriguez,Cécile Grohs,Diane Esquerre,Olivier Bouchez,Marie-Noelle Rossignol,Christophe Klopp,Dominique Rocha,Sébastien Fritz,André Eggen,Phil J. Bowman,David Coote,Amanda J. Chamberlain,Charlotte Anderson,Curt P VanTassell,Ina Hulsegge,Michael E. Goddard,Bernt Guldbrandtsen,M.S. Lund,Roel F. Veerkamp,Didier Boichard,Ruedi Fries,Ben J. Hayes +29 more
TL;DR: The 1000 bull genomes project supports the goal of accelerating the rates of genetic gain in domestic cattle while at the same time considering animal health and welfare by providing the annotated sequence variants and genotypes of key ancestor bulls.
Journal ArticleDOI
The BioMart community portal: an innovative alternative to large, centralized data repositories
Damian Smedley,Syed Haider,Steffen Durinck,Luca Pandini,Paolo Provero,Paolo Provero,James E. Allen,Olivier Arnaiz,Mohammad Awedh,Richard Baldock,Giulia Barbiera,Philippe Bardou,Tim Beck,Andrew Blake,Merideth Bonierbale,Anthony J. Brookes,Gabriele Bucci,Iwan Buetti,Sarah W. Burge,Cédric Cabau,Joseph W. Carlson,Claude Chelala,Charalambos Chrysostomou,Davide Cittaro,Olivier Collin,Raul Cordova,Rosalind J. Cutts,Erik Dassi,Alex Di Genova,Anis Djari,Anthony Esposito,Heather Estrella,Eduardo Eyras,Eduardo Eyras,Julio Fernandez-Banet,Simon A. Forbes,Robert C. Free,Takatomo Fujisawa,Emanuela Gadaleta,Jose Manuel Garcia-Manteiga,David Goodstein,Kristian Gray,José Afonso Guerra-Assunção,Bernard Haggarty,Dong Jin Han,Byung Woo Han,Todd W. Harris,Jayson Harshbarger,Robert K. Hastings,Richard D. Hayes,Claire Hoede,Shen Hu,Zhi-Liang Hu,Lucie N. Hutchins,Zhengyan Kan,Hideya Kawaji,Aminah Keliet,Arnaud Kerhornou,Sunghoon Kim,Rhoda Kinsella,Christophe Klopp,Lei Kong,Daniel Lawson,Dejan Lazarevic,Ji Hyun Lee,Thomas Letellier,Chuan-Yun Li,Pietro Liò,Chu Jun Liu,Jie Luo,Alejandro Maass,Jérôme Mariette,Thomas Maurel,Stefania Merella,Azza M. Mohamed,François Moreews,Ibounyamine Nabihoudine,Nelson Ndegwa,Céline Noirot,Cristian Perez-Llamas,Michael Primig,Alessandro Quattrone,Hadi Quesneville,Davide Rambaldi,James M. Reecy,Michela Riba,Steven Rosanoff,Amna A. Saddiq,Elisa Salas,Olivier Sallou,Rebecca Shepherd,Reinhard Simon,Linda Sperling,William Spooner,Daniel M. Staines,Delphine Steinbach,Kevin R. Stone,Elia Stupka,Jon W. Teague,Abu Z. Dayem Ullah,Jun Wang,Doreen Ware,Marie Wong-Erasmus,Ken Youens-Clark,Amonida Zadissa,Shi Jian Zhang,Arek Kasprzyk,Arek Kasprzyk +107 more
TL;DR: The latest version of the BioMart Community Portal comes with many new databases that have been created by the ever-growing community and comes with better support and extensibility for data analysis and visualization tools.
Journal ArticleDOI
Detection of haplotypes associated with prenatal death in dairy cattle and identification of deleterious mutations in GART, SHBG and SLC37A2.
Sébastien Fritz,Aurélien Capitan,Anis Djari,Sabrina Rodriguez,Anne Barbat,Aurélia Baur,Cécile Grohs,Bernard Weiss,Mekki Boussaha,Diane Esquerre,Christophe Klopp,Dominique Rocha,Didier Boichard +12 more
TL;DR: A yet hidden consequence of the important inbreeding rate observed in intensively selected and specialized cattle breeds is revealed, counter-selection of these mutations and management of matings will have positive consequences on female fertility in dairy cattle.
Journal ArticleDOI
Identification of large intergenic non-coding RNAs in bovine muscle using next-generation transcriptomic sequencing
Coline Billerey,Mekki Boussaha,Mekki Boussaha,Diane Esquerre,Emmanuelle Rebours,Emmanuelle Rebours,Anis Djari,Cédric Meersseman,Cédric Meersseman,Christophe Klopp,Daniel Gautheret,Daniel Gautheret,Dominique Rocha,Dominique Rocha +13 more
TL;DR: Bovine lincRNAs share characteristics seen in their mammalian counterparts: relatively short transcript and gene lengths, low exon number and significantly lower expression, compared to protein-encoding genes.
Journal ArticleDOI
Compacting and correcting Trinity and Oases RNA-Seq de novo assemblies
Cédric Cabau,Frédéric Escudié,Anis Djari,Yann Guiguen,Julien Bobe,Christophe Klopp,Christophe Klopp +6 more
TL;DR: The de novo RNA-seq assembly pipeline (DRAP) as discussed by the authors is an easy-to-use software package to produce compact and corrected transcript set, which reduces the number of contigs needed to represent the transcriptome.