Barry John Conn

Bio: Barry John Conn is an academic researcher from University of Sydney. The author has contributed to research in topics: Prostanthera & Genus. The author has an hindex of 8, co-authored 50 publications receiving 199 citations.

Great Expectations: Correlations between Pollinator Assemblages and Floral Characters in Lamiaceae

Abstract: Premise of research. Pollination syndromes are used to infer pollinators from floral attributes when field observations of floral visitors are lacking. Such inferences are often found to be incorrect or too generalized. To investigate the relationship between pollinators and observable differences in a genus of Lamiaceae with flowers that appear ornithophilous and entomophilous, we experimentally quantified floral morphology and pollinator assemblages in a phylogenetic perspective.Methodology. Floral morphology was examined using multivariate analysis of geometric morphometrics (corolla shape described by landmarks), linear dimensions, and nonmetric attributes for 17 species of Prostanthera. Pollination effectiveness was determined through censuses of floral visitors and interactions by pollinators with flowers, and multivariate statistics were used to examine correspondence between these data and nonlandmark characters. Ancestral state reconstruction was performed using geometric morphometric data and a ...

Phylogenetic relationships in Loganieae (Loganiaceae) inferred from nuclear ribosomal and chloroplast DNA sequence data

Abstract: Molecular systematics has clarified the limits of Loganiaceae (Gentianales), the tribal circumscriptions and the phylogenetic relationships within the family. Loganieae includes seven genera; however, generic boundaries remain untested and intergeneric relationships are largely unknown. The chloroplast intron petD and the nuclear ribosomal ETS were sequenced for 37 ingroup accessions, including all genera of Loganieae, to infer generic and infrageneric boundaries and intergeneric relationships within the tribe. Maximum parsimony and Bayesian analyses resolved several strongly supported clades. Mitreola s. str. was placed sister to the rest of Loganieae. The south-western Australian endemic, Mitreola minima B.J.Conn, was placed sister to Mitrasacme, Schizacme and Phyllangium, rendering Mitreola polyphyletic. Mitrasacme, Logania section Logania and L. section Stomandra were each strongly supported as monophyletic, but there was no support for the monophyly of Logania. Geniostoma was paraphyletic with respect to a monophyletic Labordia. It is here recommended that Mitreola minima be afforded generic status and that the three species of Labordia used in the present study be reduced to synonymy of Geniostoma. Additional sampling is needed to clarify the relationship between Logania section Logania and L. section Stomandra and to increase support for intergeneric relationships in Loganieae.

Infrageneric phylogeny of Chloantheae (Lamiaceae) based on chloroplast ndhF and nuclear ITS sequence data

Abstract: The tribe Chloantheae (Prostantheroideae, Lamiaceae) currently consists of over 100 species in nine genera, all of which are endemic to Australia. Generic delimitations were assessed using chloroplast 3′ndhF and nuclear ITS nucleotide sequence data for up to seventy species. Analyses of the two datasets, independently and in combination, used maximum parsimony and Bayesian phylogenetic inference methods. Topologies derived from each marker were broadly congruent, but better resolution and stronger branch support was achieved by combining the datasets. The monophyly of the Chloantheae was confirmed. Brachysola is sister to the rest of the tribe and Chloanthes, Cyanostegia and Dicrastylis (including Mallophora) are monophyletic. Although the species within Dicrastylis were only partially resolved, it appears likely that the current sectional classification of this genus will require revision. A clade containing Newcastelia, Physopsis and Lachnostachys (=Physopsideae) was recovered, but the topology indicates that the current generic circumscriptions need further investigation. A close relationship between Hemiphora elderi, Pityrodia bartlingii and P. uncinata was resolved and reflects their palynological and carpological similarities. The relationship between remaining species of Pityrodia was incompletely resolved.

Molecular phylogeny and systematics of Prostanthera (Lamiaceae)

Abstract: Prostanthera is the largest genus of Lamiaceae in Australia and was last comprehensively revised in 1870. To test the classification, and the homology of the morphological characters on which it is based, we analysed nuclear (ETS) and chloroplast (trnT–F and ndhF–rpl32) sequence data for 71 species of Westringieae (Lamiaceae) in separate and combined datasets by using maximum-parsimony and Bayesian-inference methods. Results supported the monophyly of the Westringieae, but indicated that Prostanthera is paraphyletic with respect to Wrixonia, requiring the latter to be synonymised with the former. Although combinations of datasets provided some degree of infrageneric resolution within Prostanthera sensu lato, none of its sections or series could be recovered unambiguously. Prostanthera section Prostanthera and P. section Klanderia (regarded as entomophilous and ornithophilous, respectively) did not form a sister relationship, and neither could be unequivocally resolved as monophyletic. However, all species of P. section Klanderia nested within P. section Prostanthera raising the possibility that P. section Prostanthera is paraphyletic. Similarly, the phylogeny of Prostanthera based on molecular data could not be reconciled with the morphological definition of the traditionally recognised series. We recommend abandoning Bentham’s series as a means of organising morphological variation within the genus, but acknowledge that it is premature to discard Bentham’s sections. The evolutionary and systematic implications of the lack of congruence between our molecular phylogeny and morphologically defined subgeneric taxa are discussed.

Accounting for calibration uncertainty in phylogenetic estimation of evolutionary divergence times

Abstract: The estimation of phylogenetic divergence times from sequence data is an important component of many molecular evolutionary studies. There is now a general appreciation that the procedure of divergence dating is considerably more complex than that initially described in the 1960s by Zuckerkandl and Pauling (1962, 1965). In particular, there has been much critical attention toward the assumption of a global molecular clock, resulting in the development of increasingly sophisticated techniques for inferring divergence times from sequence data. In response to the documentation of widespread departures from clocklike behavior, a variety of local- and relaxed-clock methods have been proposed and implemented. Local-clock methods permit different molecular clocks in different parts of the phylogenetic tree, thereby retaining the advantages of the classical molecular clock while casting off the restrictive assumption of a single, global rate of substitution (Rambaut and Bromham 1998; Yoder and Yang 2000).

A proposed unified framework for biological invasions.

Abstract: There has been a dramatic growth in research on biological invasions over the past 20 years, but a mature understanding of the field has been hampered because invasion biologists concerned with different taxa and different environments have largely adopted different model frameworks for the invasion process, resulting in a confusing range of concepts, terms and definitions. In this review, we propose a unified framework for biological invasions that reconciles and integrates the key features of the most commonly used invasion frameworks into a single conceptual model that can be applied to all human-mediated invasions. The unified framework combines previous stage-based and barrier models, and provides a terminology and categorisation for populations at different points in the invasion process.

A large-scale chloroplast phylogeny of the Lamiaceae sheds new light on its subfamilial classification.

Abstract: Lamiaceae, the sixth largest angiosperm family, contains more than 7000 species distributed all over the world. However, although considerable progress has been made in the last two decades, its phylogenetic backbone has never been well resolved. In the present study, a large-scale phylogenetic reconstruction of Lamiaceae using chloroplast sequences was carried out with the most comprehensive sampling of the family to date (288 species in 191 genera, representing approximately 78% of the genera of Lamiaceae). Twelve strongly supported primary clades were inferred, which form the phylogenetic backbone of Lamiaceae. Six of the primary clades correspond to the current recognized subfamilies Ajugoideae, Lamioideae, Nepetoideae, Prostantheroideae, Scutellarioideae, and Symphorematoideae, and one corresponds to a portion of Viticoideae. The other five clades comprise: 1) Acrymia and Cymaria; 2) Hymenopyramis, Petraeovitex, Peronema, and Garrettia; 3) Premna, Gmelina, and Cornutia; 4) Callicarpa; and 5) Tectona. Based on these results, three new subfamilies-Cymarioideae, Peronematoideae, and Premnoideae-are described, and the compositions of other subfamilies are updated based on new findings from the last decade. Furthermore, our analyses revealed five strongly supported, more inclusive clades that contain subfamilies, and we give them phylogenetically defined, unranked names: Cymalamiina, Scutelamiina, Perolamiina, Viticisymphorina, and Calliprostantherina.