B
Bent O. Petersen
Researcher at University of Copenhagen
Publications - 243
Citations - 13961
Bent O. Petersen is an academic researcher from University of Copenhagen. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 52, co-authored 229 publications receiving 11489 citations. Previous affiliations of Bent O. Petersen include Aarhus University & University of Copenhagen Faculty of Life Sciences.
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Journal ArticleDOI
Whole-genome analyses resolve early branches in the tree of life of modern birds
Erich D. Jarvis,Siavash Mirarab,Andre J. Aberer,Bo Li,Bo Li,Bo Li,Peter Houde,Cai Li,Cai Li,Simon Y. W. Ho,Brant C. Faircloth,Benoit Nabholz,Jason T. Howard,Alexander Suh,Claudia C. Weber,Rute R. da Fonseca,Jianwen Li,Fang Zhang Zhang,Hui Li,Long Zhou,Nitish Narula,Nitish Narula,Liang Liu,Ganesh Ganapathy,Bastien Boussau,Shamsuzzoha Bayzid,Volodymyr Zavidovych,Sankar Subramanian,Toni Gabaldón,Salvador Capella-Gutierrez,Jaime Huerta-Cepas,Bhanu Rekepalli,Bhanu Rekepalli,Kasper Munch,Mikkel H. Schierup,Bent E. K. Lindow,Wesley C. Warren,David A. Ray,Richard E. Green,Michael William Bruford,Xiangjiang Zhan,Xiangjiang Zhan,Andrew Dixon,Shengbin Li,Ning Li,Yinhua Huang,Elizabeth P. Derryberry,Elizabeth P. Derryberry,Mads F. Bertelsen,Frederick H. Sheldon,Robb T. Brumfield,Claudio V. Mello,Claudio V. Mello,Peter V. Lovell,Morgan Wirthlin,Maria Paula Cruz Schneider,Francisco Prosdocimi,José Alfredo Samaniego,Amhed Missael Vargas Velazquez,Alonzo Alfaro-Núñez,Paula F. Campos,Bent O. Petersen,Thomas Sicheritz-Pontén,An Pas,Thomas L. Bailey,R. Paul Scofield,Michael Bunce,David M. Lambert,Qi Zhou,Polina L. Perelman,Amy C. Driskell,Beth Shapiro,Zijun Xiong,Yongli Zeng,Shiping Liu,Zhenyu Li,Binghang Liu,Kui Wu,Jin Xiao,Xiong Yinqi,Quiemei Zheng,Yong Zhang,Huanming Yang,Jian Wang,Linnéa Smeds,Frank E. Rheindt,Michael J. Braun,Jon Fjeldså,Ludovic Orlando,F. Keith Barker,Knud A. Jønsson,Warren E. Johnson,Klaus-Peter Koepfli,Stephen J. O'Brien,David Haussler,Oliver A. Ryder,Carsten Rahbek,Eske Willerslev,Gary R. Graves,Gary R. Graves,Travis C. Glenn,John E. McCormack,Dave Burt,Hans Ellegren,Per Alström,Scott V. Edwards,Alexandros Stamatakis,David P. Mindell,Joel Cracraft,Edward L. Braun,Tandy Warnow,Tandy Warnow,Wang Jun,M. Thomas P. Gilbert,M. Thomas P. Gilbert,Guojie Zhang,Guojie Zhang +116 more
TL;DR: A genome-scale phylogenetic analysis of 48 species representing all orders of Neoaves recovered a highly resolved tree that confirms previously controversial sister or close relationships and identifies the first divergence in Neoaves, two groups the authors named Passerea and Columbea.
Journal ArticleDOI
The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
Jo Ann Banks,Tomoaki Nishiyama,Mitsuyasu Hasebe,Mitsuyasu Hasebe,John L. Bowman,John L. Bowman,Michael Gribskov,Claude W. dePamphilis,Victor A. Albert,Naoki Aono,Tsuyoshi Aoyama,Tsuyoshi Aoyama,Barbara A. Ambrose,Neil W. Ashton,Michael J. Axtell,Elizabeth I. Barker,Michael S. Barker,Jeffrey L. Bennetzen,Nicholas D. Bonawitz,Clint Chapple,Chaoyang Cheng,Luiz Gustavo Guedes Corrêa,Michael Dacre,Jeremy D. DeBarry,Ingo Dreyer,Marek Eliáš,Eric M. Engstrom,Mark Estelle,Liang Feng,Cédric Finet,Sandra K. Floyd,Wolf B. Frommer,Tomomichi Fujita,Lydia Gramzow,Michael Gutensohn,Michael Gutensohn,Jesper Harholt,Mitsuru Hattori,Mitsuru Hattori,Alexander Heyl,Tadayoshi Hirai,Yuji Hiwatashi,Yuji Hiwatashi,Masaki Ishikawa,Mineko Iwata,Kenneth G. Karol,Barbara Koehler,Uener Kolukisaoglu,Uener Kolukisaoglu,Minoru Kubo,Tetsuya Kurata,Sylvie Lalonde,Kejie Li,Ying Li,Ying Li,Amy Litt,Eric Lyons,Gerard Manning,Takeshi Maruyama,Todd P. Michael,Koji Mikami,Saori Miyazaki,Saori Miyazaki,Shin-Ichi Morinaga,Shin-Ichi Morinaga,TakashiMurata,TakashiMurata,Bernd Mueller-Roeber,David R. Nelson,Mari Obara,Yasuko Oguri,Richard G. Olmstead,Naoko T. Onodera,Bent O. Petersen,Birgit Pils,Michael J. Prigge,Stefan A. Rensing,Diego Mauricio Riaño-Pachón,Diego Mauricio Riaño-Pachón,Alison W. Roberts,Yoshikatsu Sato,Henrik Vibe Scheller,Henrik Vibe Scheller,Burkhard Schulz,Christian Schulz,Eugene V. Shakirov,Nakako Shibagaki,Naoki Shinohara,Dorothy E. Shippen,Iben Sørensen,Iben Sørensen,Ryo Sotooka,Nagisa Sugimoto,Mamoru Sugita,Naomi Sumikawa,Milos Tanurdzic,Günter Theißen,Peter Ulvskov,Sachiko Wakazuki,Jing-Ke Weng,Jing-Ke Weng,William G.T. Willats,Daniel Wipf,Paul G. Wolf,Lixing Yang,Andreas Zimmer,Qihui Zhu,Therese Mitros,Uffe Hellsten,Dominique Loqué,Robert Otillar,Asaf Salamov,Jeremy Schmutz,Harris Shapiro,Erika Lindquist,Susan Lucas,Daniel S. Rokhsar,Daniel S. Rokhsar,Igor V. Grigoriev +118 more
TL;DR: The genome sequence of the lycophyte Selaginella moellendorffii (Selaginella), the first nonseed vascular plant genome reported, is reported, finding that the transition from a gametophytes- to a sporophyte-dominated life cycle required far fewer new genes than the Transition from a non Seed vascular to a flowering plant.
Journal ArticleDOI
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse.
Ludovic Orlando,Aurélien Ginolhac,Guojie Zhang,Duane G. Froese,Anders Albrechtsen,Mathias Stiller,Mikkel Schubert,Enrico Cappellini,Bent O. Petersen,Ida Moltke,Ida Moltke,Philip L. F. Johnson,Matteo Fumagalli,Julia T. Vilstrup,Maanasa Raghavan,Thorfinn Sand Korneliussen,Anna-Sapfo Malaspinas,Josef Korbinian Vogt,Damian Szklarczyk,Damian Szklarczyk,Christian D. Kelstrup,Jakob Vinther,Andrei Dolocan,Jesper Stenderup,Amhed Missael Vargas Velazquez,James A. Cahill,Morten Rasmussen,Xiaoli Wang,Jiumeng Min,Grant D. Zazula,Andaine Seguin-Orlando,Cecilie Mortensen,Kim Magnussen,John F. Thompson,Jacobo Weinstock,Kristian Gregersen,Knut Røed,Véra Eisenmann,Carl-Johan Rubin,Donald Miller,Douglas F. Antczak,Mads F. Bertelsen,Søren Brunak,Khaled A. S. Al-Rasheid,Oliver A. Ryder,Leif Andersson,John Mundy,Anders Krogh,M. Thomas P. Gilbert,Kurt H. Kjær,Thomas Sicheritz-Pontén,Lars Juhl Jensen,Jesper V. Olsen,Michael Hofreiter,Rasmus Nielsen,Beth Shapiro,Jun Wang,Eske Willerslev,Eske Willerslev +58 more
TL;DR: Thealyses suggest that the Equus lineage giving rise to all contemporary horses, zebras and donkeys originated 4.0–4.5 million years before present, twice the conventionally accepted time to the most recent common ancestor of the genus Equus, and supports the contention that Przewalski's horses represent the last surviving wild horse population.
Journal ArticleDOI
A generic method for assignment of reliability scores applied to solvent accessibility predictions
Bent O. Petersen,Thomas Nordahl Petersen,Pernille Andersen,Pernille Andersen,Morten Nielsen,Claus Lundegaard +5 more
TL;DR: This work has implemented a method that predicts the relative surface accessibility of an amino acid and simultaneously predicts the reliability for each prediction, in the form of a Z-score, which is comparable to the performance of the currently best public available method, Real-SPINE.
Journal ArticleDOI
Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage
Rene S. Hendriksen,Patrick Munk,Patrick Murigu Kamau Njage,Bram A. D. van Bunnik,Luke McNally,Oksana Lukjancenko,Timo Röder,David F. Nieuwenhuijse,Susanne Karlsmose Pedersen,Jette Kjeldgaard,Rolf Sommer Kaas,Philip Thomas Lanken Conradsen Clausen,Josef Korbinian Vogt,Pimlapas Leekitcharoenphon,Milou G.M. van de Schans,T. Zuidema,Ana Maria de Roda Husman,Simon Rasmussen,Bent O. Petersen,Clara Amid,Guy Cochrane,Thomas Sicheritz-Pontén,Heike Schmitt,Jorge Raul Matheu Alvarez,Awa Aidara-Kane,Sünje Johanna Pamp,Ole Lund,Tine Hald,Mark E. J. Woolhouse,Marion Koopmans,Håkan Vigre,Thomas Nordahl Petersen,Frank Møller Aarestrup +32 more
TL;DR: It is suggested that global AMR gene diversity and abundance vary by region, and that improving sanitation and health could potentially limit the global burden of AMR.