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Brett R Whitty
Researcher at Michigan State University
Publications - 12
Citations - 4320
Brett R Whitty is an academic researcher from Michigan State University. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 10, co-authored 12 publications receiving 3873 citations. Previous affiliations of Brett R Whitty include University of Maryland, Baltimore & J. Craig Venter Institute.
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Journal ArticleDOI
Genome sequence and analysis of the tuber crop potato.
Xun Xu,Shengkai Pan,Shifeng Cheng,Bo Zhang,Mu D,Peixiang Ni,Gengyun Zhang,Shuang Yang,Ruiqiang Li,Jun Wang,Gisella Orjeda,Frank Guzman,Torres M,Roberto Lozano,Olga Ponce,Diana Martinez,De la Cruz G,Chakrabarti Sk,Patil Vu,Konstantin G. Skryabin,Boris B. Kuznetsov,Nikolai V. Ravin,Tatjana V. Kolganova,Alexey V. Beletsky,Andrey V. Mardanov,Di Genova A,Dan Bolser,David M. A. Martin,Li G,Yang Y,Hanhui Kuang,Hu Q,Xiong X,Gerard J. Bishop,Boris Sagredo,Nilo Mejía,Zagorski W,Robert Gromadka,Jan Gawor,Pawel Szczesny,Sanwen Huang,Zhang Z,Liang C,He J,Li Y,He Y,Xu J,Youjun Zhang,Xie B,Du Y,Qu D,Merideth Bonierbale,Marc Ghislain,Herrera Mdel R,Giovanni Giuliano,Marco Pietrella,Gaetano Perrotta,Paolo Facella,O'Brien K,Sergio Enrique Feingold,Barreiro Le,Massa Ga,Luis Aníbal Diambra,Brett R Whitty,Brieanne Vaillancourt,Lin H,Alicia N. Massa,Geoffroy M,Lundback S,Dean DellaPenna,Buell Cr,Sanjeev Kumar Sharma,David Marshall,Robbie Waugh,Glenn J. Bryan,Destefanis M,Istvan Nagy,Dan Milbourne,Susan Thomson,Mark Fiers,Jeanne M. E. Jacobs,Kåre Lehmann Nielsen,Mads Sønderkær,Marina Iovene,Giovana Augusta Torres,Jiming Jiang,Richard E. Veilleux,Christian W. B. Bachem,de Boer J,Theo Borm,Bjorn Kloosterman,van Eck H,Erwin Datema,Hekkert Bt,Aska Goverse,van Ham Rc,Richard G. F. Visser +96 more
TL;DR: The potato genome sequence provides a platform for genetic improvement of this vital crop and predicts 39,031 protein-coding genes and presents evidence for at least two genome duplication events indicative of a palaeopolyploid origin.
Journal ArticleDOI
International Cancer Genome Consortium Data Portal—a one-stop shop for cancer genomics data
Junjun Zhang,Joachim Baran,Anthony Cros,Jonathan M. Guberman,Syed Haider,Jack Hsu,Yong Liang,Elena Rivkin,Jianxin Wang,Brett R Whitty,Marie Wong-Erasmus,Long Yao,Arek Kasprzyk +12 more
TL;DR: The organization, functionality, and capabilities of the ICGC Data Portal are described, which allows each ICGC member institution to manage and maintain its own databases locally, while seamlessly presenting all the data in a single access point for users.
Journal ArticleDOI
Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus
Natalie D. Fedorova,Nora Khaldi,Vinita Joardar,Rama Maiti,Paolo Amedeo,Michael J. Anderson,Jonathan Crabtree,Joana C. Silva,Jonathan H. Badger,Ahmed A. Albarraq,Samuel V. Angiuoli,Howard Bussey,Paul Bowyer,Peter J. Cotty,Paul S. Dyer,Amy Egan,Kevin Galens,Claire M. Fraser-Liggett,Brian J. Haas,Jason M. Inman,Richard Kent,Sébastien Lemieux,Iran Malavazi,Joshua Orvis,Terry Roemer,Catherine M. Ronning,Jaideep P. Sundaram,Granger G. Sutton,G Turner,J. Craig Venter,Owen White,Brett R Whitty,Phil Youngman,Kenneth H. Wolfe,Gustavo H. Goldman,Jennifer R. Wortman,Bo Jiang,David W. Denning,William C. Nierman,William C. Nierman +39 more
TL;DR: The genome sequences of a new clinical isolate of the important human pathogen, Aspergillus fumigatus, A1163, and two closely related but rarely pathogenic species, Neosartorya fischeri NRRL181 and As pergillus clavatus NRRL1 are presented.
Journal ArticleDOI
Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire
C. André Lévesque,C. André Lévesque,H. Brouwer,Liliana M. Cano,John P. Hamilton,Carson Holt,Edgar Huitema,Sylvain Raffaele,Gregg P. Robideau,Gregg P. Robideau,Marco Thines,Joe Win,Marcelo M. Zerillo,Gordon W. Beakes,Jeffrey L. Boore,Dana A. Busam,Bernard Dumas,Steve Ferriera,Susan I. Fuerstenberg,Claire M. M. Gachon,Elodie Gaulin,Francine Govers,Laura J. Grenville-Briggs,Neil R. Horner,Jessica B. Hostetler,Rays H. Y. Jiang,Justin Johnson,Theerapong Krajaejun,Haining Lin,Harold J. G. Meijer,Barry Moore,Paul Morris,Vipaporn Phuntmart,Daniela Puiu,Jyoti Shetty,Jason E. Stajich,Sucheta Tripathy,Stephan Wawra,Pieter van West,Brett R Whitty,Pedro M. Coutinho,Bernard Henrissat,Frank N. Martin,Paul Thomas,Brett M. Tyler,Ronald P. de Vries,Sophien Kamoun,Mark Yandell,Ned Tisserat,C. Robin Buell +49 more
TL;DR: Access to the P. ultimum genome has revealed not only core pathogenic mechanisms within the oomycetes but also lineage-specific genes associated with the alternative virulence and lifestyles found within the pythiaceous lineages compared to the Peronosporaceae.
Journal ArticleDOI
Transcriptional Profiling Implicates Novel Interactions Between Abiotic Stress and Hormonal Responses in Thellungiella, a Close Relative of Arabidopsis
Chui E. Wong,Yong Li,Aurélie Labbe,David Guevara,Paulo A. S. Nuin,Brett R Whitty,Claudia Diaz,G. Brian Golding,Gordon R. Gray,Elizabeth A. Weretilnyk,Marilyn Griffith,Barbara A. Moffatt +11 more
TL;DR: Thellungiella, an Arabidopsis (Arabidopsis thaliana)-related halophyte, is an emerging model species for studies designed to elucidate molecular mechanisms of abiotic stress tolerance.