C
Carlos Bustamante
Researcher at Stanford University
Publications - 799
Citations - 122303
Carlos Bustamante is an academic researcher from Stanford University. The author has contributed to research in topics: Population & DNA. The author has an hindex of 161, co-authored 770 publications receiving 106053 citations. Previous affiliations of Carlos Bustamante include Lawrence Berkeley National Laboratory & University of California.
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Journal ArticleDOI
Genome-wide patterns of nucleotide polymorphism in domesticated rice
Ana L. Caicedo,Scott Williamson,Ryan D. Hernandez,Adam R. Boyko,Adi Fledel-Alon,Thomas L. York,Nicholas R. Polato,Kenneth M. Olsen,Rasmus Nielsen,Susan R. McCouch,Carlos Bustamante,Michael D. Purugganan,Michael D. Purugganan +12 more
TL;DR: It is found that a simple bottleneck model cannot explain the derived nucleotide polymorphism site frequency spectrum in rice, and a bottleneck model that incorporates selective sweeps, or a more complex demographic model that includes subdivision and gene flow are more plausible explanations for patterns of variation in domesticated rice varieties.
Journal ArticleDOI
Proportionally more deleterious genetic variation in European than in African populations
Kirk E. Lohmueller,Amit Indap,Steffen Schmidt,Adam R. Boyko,Ryan D. Hernandez,Melissa J. Hubisz,John J. Sninsky,Thomas J. White,Shamil R. Sunyaev,Rasmus Nielsen,Andrew G. Clark,Carlos Bustamante +11 more
TL;DR: This work combines genome-wide polymorphism data from PCR-based exon resequencing, comparative genomic data across mammalian species, and protein structure predictions to estimate the number of functionally consequential single-nucleotide polymorphisms carried by each of 15 and 20 African American and 20 European American individuals.
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The genetics of Mexico recapitulates Native American substructure and affects biomedical traits
Andrés Moreno-Estrada,Christopher R. Gignoux,Juan Carlos Fernández-López,Fouad Zakharia,Martin Sikora,Alejandra V. Contreras,Victor Acuña-Alonzo,Karla Sandoval,Celeste Eng,Sandra Romero-Hidalgo,Patricia Ortiz-Tello,Victoria Robles,Eimear E. Kenny,Ismael Nuño-Arana,Rodrigo Barquera-Lozano,Gastón Macín-Pérez,Julio Granados-Arriola,Scott Huntsman,Joshua Galanter,Marc Via,Jean G. Ford,Rocio Chapela,William Rodriguez-Cintron,J.R. Rodriguez-Santana,Isabelle Romieu,Juan José Luis Sienra-Monge,Blanca E. del Rio Navarro,Stephanie J. London,Andres Ruiz-Linares,Rodrigo García-Herrera,Karol Estrada,Alfredo Hidalgo-Miranda,Gerardo Jimenez-Sanchez,Alessandra Carnevale,Xavier Soberón,Samuel Canizales-Quinteros,Héctor Rangel-Villalobos,Irma Silva-Zolezzi,Esteban G. Burchard,Carlos Bustamante +39 more
TL;DR: Pre-Columbian genetic substructure is recapitulated in the indigenous ancestry of admixed mestizo individuals across the country, and two independently phenotyped cohorts of Mexicans and Mexican Americans showed a significant association between subcontinental ancestry and lung function.
Journal ArticleDOI
Grabbing the cat by the tail: manipulating molecules one by one.
TL;DR: Methods for manipulating single molecules are yielding new information about both the forces that hold biomolecules together and the mechanics of molecular motors.
Journal ArticleDOI
New insights into the Tyrolean Iceman's origin and phenotype as inferred by whole-genome sequencing
Andreas Keller,Angela Graefen,Markus Ball,Mark Matzas,Valesca Boisguerin,Frank Maixner,Petra Leidinger,Christina Backes,Rabab Khairat,Michael Forster,Bjoern Stade,Andre Franke,Jens Mayer,Jessica Spangler,Stephen F. McLaughlin,Minita Shah,Clarence Lee,Timothy T. Harkins,Alexander Sartori,Andrés Moreno-Estrada,Brenna M. Henn,Martin Sikora,Ornella Semino,Jacques Chiaroni,Siiri Rootsi,Natalie M. Myres,Vicente M. Cabrera,Peter A. Underhill,Carlos Bustamante,Eduard Egarter Vigl,Marco Samadelli,Giovanna Cipollini,Jan Haas,Hugo A. Katus,Brian O'Connor,Marc R. J. Carlson,Benjamin Meder,Nikolaus Blin,Nikolaus Blin,Eckart Meese,Carsten M. Pusch,Albert Zink +41 more
TL;DR: The complete genome sequence of the Iceman is reported and 100% concordance between the previously reported mitochondrial genome sequence and the consensus sequence generated from the genomic data is shown.