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Chad Nusbaum
Researcher at Massachusetts Institute of Technology
Publications - 70
Citations - 69227
Chad Nusbaum is an academic researcher from Massachusetts Institute of Technology. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 48, co-authored 69 publications receiving 62980 citations. Previous affiliations of Chad Nusbaum include Barts Health NHS Trust & Uniformed Services University of the Health Sciences.
Papers
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Journal ArticleDOI
The EN-TEx resource of multi-tissue personal epigenomes & variant-impact models
Joel Rozowsky,Jorg Drenkow,Yucheng T. Yang,Gamze Gursoy,Timur R. Galeev,Beatrice Borsari,Charles B. Epstein,Kun Xiong,Jinrui Xu,Jiahao Gao,Kai Yu,Ana Berthel,Zhanlin Chen,Fabio C. P. Navarro,Jason Liu,Maxwell S Sun,James C. Wright,Justin Chang,Christopher J. F. Cameron,Noam Shoresh,Elizabeth Gaskell,Jessika Adrian,Sergey Aganezov,François Aguet,Gabriela Balderrama-Gutierrez,Samridhi Banskota,G. Corona,Sora Chee,Surya B. Chhetri,Gabriel Conte Cortez Martins,Cassidy Danyko,Carrie A. Davis,Daniel Farid,Nina Farrell,Idan Gabdank,Yoel Gofin,David U. Gorkin,Mengting Gu,Vivian C. Hecht,Benjamin C. Hitz,Robbyn Issner,Melanie Kirsche,Xiangmeng Kong,Bonita R Lam,Shantao Li,Bian Li,Tianxiao Li,Xiqi Li,Khine Lin,Ruibang Luo,Mark Mackiewicz,Jill Moore,Jonathan M. Mudge,Nicholas C Nelson,Chad Nusbaum,Ioann O. Popov,Henry Pratt,Yunjiang Qiu,Srividya Ramakrishnan,Joe Raymond,Leonidas Salichos,Alexandra Scavelli,Jacob Schreiber,Fritz J. Sedlazeck,Lei-Hoon See,Rachel M. Sherman,Xu Shi,Minyi Shi,Cricket A. Sloan,J. Seth Strattan,Zhen Tan,Forrest Y. Tanaka,Anna Vlasova,Jun Wang,Jonathan D. Werner,Brian A. Williams,Min Xu,Chengfei Yan,Lu Yu,Chris Zaleski,Jing Zhang,Kristin G. Ardlie,J. M. Cherry,Eric M. Mendenhall,William Noble,Zhiping Weng,Morgan E. Levine,Alexander Dobin,Barbara J. Wold,Ali Mortazavi,Bing Ren,Jesse Gillis,Richard M. Myers,Michael Snyder,Jyoti S. Choudhary,Aleksandar Milosavljević,Michael C. Schatz,Roderic Guigó,Bradley E. Bernstein,Thomas R. Gingeras,Mark Gerstein +100 more
TL;DR: The EN-TEx dataset as mentioned in this paper contains 1,635 open-access datasets from four donors (∼30 tissues × ∼15 assays) mapped to matched, diploid genomes with long read phasing and structural variants, instantiating a catalog of >1 million allele-specific loci.
Journal ArticleDOI
Corrigendum: DNA sequence and analysis of human chromosome 18
Chad Nusbaum,Michael C. Zody,Mark L. Borowsky,Michael Kamal,Chinnappa D. Kodira,Todd D. Taylor,Charles Whittaker,Jean L. Chang,Christina A. Cuomo,Ken Dewar,Michael Fitzgerald,Xiaoping Yang,Amr Abouelleil,Nicole R. Allen,Scott F. Anderson,Toby Bloom,Boris Bugalter,Jonathan Butler,April Cook,David DeCaprio,Reinhard Engels,Manuel Garber,Andreas Gnirke,Nabil Hafez,Jennifer L. Hall,Catherine Hosage Norman,Takehiko Itoh,David B. Jaffe,Yoko Kuroki,Jessica A. Lehoczky,Annie Lui,Pendexter Macdonald,Evan Mauceli,Tarjei S. Mikkelsen,Jerome Naylor,Robert Nicol,Cindy Nguyen,Hideki Noguchi,Sinéad B. O'Leary,Keith O'Neill,Bruno Piqani,Cherylyn Smith,Jessica A. Talamas,Kerri Topham,Yasushi Totoki,Atsushi Toyoda,H Wain,Sarah Young,Qiandong Zeng,Andrew Zimmer,Asao Fujiyama,Masahira Hattori,Bruce W. Birren,Yoshiyuki Sakaki,Eric S. Lander +54 more
TL;DR: The name of Keith O'Neill was accidentally omitted from the published author list as discussed by the authors, and he is at the first affiliation in the address list, which is the only known affiliation of an author in the list.
Methodfully automated process for construction of sequence-ready barcoded libraries for 454
Niall J. Lennon,Robert E. Lintner,Scott Anderson,Pablo Alvarez,Andrew Barry,William Brockman,Riza M. Daza,Rachel L. Erlich,Georgia Giannoukos,Lisa Green,Andrew Hollinger,Cindi A. Hoover,David B. Jaffe,Frank Juhn,Danielle McCarthy,Danielle Perrin,Karen Ponchner,Taryn L Powers,Kamran Rizzolo,Dana Robbins,Elizabeth M. Ryan,Carsten Russ,Todd Sparrow,John Stalker,Scott Steelman,Michael Weiand,Andrew Zimmer,Matthew R. Henn,Chad Nusbaum,Robert Nicol +29 more
TL;DR: An automated, high throughput library constr uction process for 454 technology, using automated-friendly magnetic bead-based size selection and cleanup steps, to create sequence-ready 454 libraries in 2 days, a dramatic improvement over the standard method.
Yeast Sterol Regulatory Element-binding Protein (SREBP) Cleavage Requires Cdc48 and Dsc5, a Ubiquitin Regulatory X
Emerson V. Stewart,S. Julie-Ann Lloyd,John S. Burg,Christine C. Nwosu,Robert E. Lintner,Riza M. Daza,Carsten Russ,Karen Ponchner,Chad Nusbaum,Peter J. Espenshade +9 more
Patent
Sélection d'acides nucléiques par hybridation en solution en amorces oligonucléotidiques
TL;DR: In this article, a porte sur des procedes de selection d'acides nucleiques a l'aide d'une hybridation en solution, sur des procedures de sequencage d'ACides nucleique comprenant de tels procedes of selection and sur des produits destines a etre utilises dans les procedes.