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Charles Blatti
Researcher at University of Illinois at Urbana–Champaign
Publications - 36
Citations - 2193
Charles Blatti is an academic researcher from University of Illinois at Urbana–Champaign. The author has contributed to research in topics: Gene regulatory network & Regulation of gene expression. The author has an hindex of 15, co-authored 34 publications receiving 1916 citations.
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Journal ArticleDOI
The genome of a songbird
Wesley C. Warren,David F. Clayton,Hans Ellegren,Arthur P. Arnold,LaDeana W. Hillier,Axel Künstner,Steve Searle,Simon D. M. White,Albert J. Vilella,Susan Fairley,Andreas Heger,Lesheng Kong,Chris P. Ponting,Erich D. Jarvis,Claudio V. Mello,Patrick Minx,Peter V. Lovell,Tarciso A. F. Velho,Margaret Ferris,Christopher N. Balakrishnan,Saurabh Sinha,Charles Blatti,Sarah E. London,Yun Li,Ya-Chi Lin,Jimin George,Jonathan V. Sweedler,Bruce R. Southey,Preethi H. Gunaratne,Michael E. Watson,Kiwoong Nam,Niclas Backström,Linnéa Smeds,Benoit Nabholz,Yuichiro Itoh,Osceola Whitney,Andreas R. Pfenning,Jason T. Howard,Martin Völker,Benjamin M. Skinner,Darren K. Griffin,Liang Ye,William M. McLaren,Paul Flicek,Víctor Quesada,Gloria Velasco,Carlos López-Otín,Xose S. Puente,Tsviya Olender,Doron Lancet,Arian F.A. Smit,Robert Hubley,Miriam K. Konkel,Jerilyn A. Walker,Mark A. Batzer,Wanjun Gu,David D. Pollock,Lin Chen,Ze Cheng,Evan E. Eichler,Jessica Stapley,Jon Slate,Robert Ekblom,Tim R. Birkhead,Terry Burke,David W. Burt,Constance Scharff,Iris Adam,Hugues Richard,Marc Sultan,Alexey Soldatov,Hans Lehrach,Scott V. Edwards,Shiaw-Pyng Yang,XiaoChing Li,Tina Graves,Lucinda Fulton,Joanne O. Nelson,Asif T. Chinwalla,Shunfeng Hou,Elaine R. Mardis,Richard K. Wilson +81 more
TL;DR: This work shows that song behaviour engages gene regulatory networks in the zebra finch brain, altering the expression of long non-coding RNAs, microRNAs, transcription factors and their targets and shows evidence for rapid molecular evolution in the songbird lineage of genes that are regulated during song experience.
Journal ArticleDOI
Genomic signatures of evolutionary transitions from solitary to group living
Karen M. Kapheim,Karen M. Kapheim,Hailin Pan,Cai Li,Steven L. Salzberg,Steven L. Salzberg,Daniela Puiu,Tanja Magoc,Hugh M. Robertson,Matthew E. Hudson,Aarti Venkat,Aarti Venkat,Brielle J. Fischman,Brielle J. Fischman,Alvaro G. Hernandez,Mark Yandell,Daniel D. Ence,Carson Holt,George D. Yocum,William P. Kemp,Jordi Bosch,Robert M. Waterhouse,Evgeny M. Zdobnov,Evgeny M. Zdobnov,Eckart Stolle,Eckart Stolle,F. Bernhard Kraus,Sophie Helbing,Robin F. A. Moritz,Karl M. Glastad,Brendan G. Hunt,Michael A. D. Goodisman,Frank Hauser,Cornelis J. P. Grimmelikhuijzen,Daniel Guariz Pinheiro,Daniel Guariz Pinheiro,Francis M. F. Nunes,Michelle P.M. Soares,E. D. Tanaka,Zilá Luz Paulino Simões,Klaus Hartfelder,Jay D. Evans,Seth M. Barribeau,Reed M. Johnson,Jonathan Massey,Jonathan Massey,Bruce R. Southey,Martin Hasselmann,Daniel Hamacher,Matthias Biewer,Clement F. Kent,Clement F. Kent,Amro Zayed,Charles Blatti,Saurabh Sinha,J. Spencer Johnston,Shawn J. Hanrahan,Sarah D. Kocher,Jun Wang,Gene E. Robinson,Guojie Zhang +60 more
TL;DR: There is no single road map to eusociality; independent evolutionary transitions in sociality have independent genetic underpinnings and these transitions do have similar general features, including an increase in constrained protein evolution accompanied by increases in the potential for gene regulation and decreases in diversity and abundance of transposable elements.
Journal ArticleDOI
Thermodynamics-Based Models of Transcriptional Regulation by Enhancers: The Roles of Synergistic Activation, Cooperative Binding and Short-Range Repression
TL;DR: A thermodynamics-based model to predict gene expression driven by any DNA sequence, as a function of transcription factor concentrations and their DNA-binding specificities is developed, and is the first publicly available program for simultaneously modeling the regulatory activities of a given set of sequences.
Journal ArticleDOI
Core and region-enriched networks of behaviorally regulated genes and the singing genome.
Osceola Whitney,Andreas R. Pfenning,Andreas R. Pfenning,Jason T. Howard,Charles Blatti,Fang Liu,James M. Ward,Rui Wang,Jean-Nicolas Audet,Manolis Kellis,Sayan Mukherjee,Saurabh Sinha,Alexander J. Hartemink,Anne E. West,Erich D. Jarvis +14 more
TL;DR: A dual mechanism for the diversity of behaviorally regulated genes across different brain regions in vivo is proposed, finding that singing was associated with differential regulation of about 10% of all genes in the avian genome that came in several waves across time.
Journal ArticleDOI
Lung epithelial and endothelial damage, loss of tissue repair, inhibition of fibrinolysis, and cellular senescence in fatal COVID-19.
Felice D’Agnillo,Kathie-Anne Walters,Yongli Xiao,Zong-Mei Sheng,Kelsey Scherler,Jae-Keun Park,Sebastian Gygli,Luz Angela Rosas,Kaitlyn Sadtler,Heather Kalish,Charles Blatti,Ruoqing Zhu,Lisa Gatzke,Colleen Bushell,Matthew J. Memoli,Steven J. O'Day,Trevan D Fischer,Terese C. Hammond,Raymond Lee,J. Christian Cash,Matthew E Powers,Grant E. O'Keefe,Kelly J. Butnor,Amy Rapkiewicz,William D. Travis,Scott P Layne,John C. Kash,Jeffery K. Taubenberger +27 more