C
Chris Duran
Researcher at Australian Centre for Plant Functional Genomics
Publications - 23
Citations - 18067
Chris Duran is an academic researcher from Australian Centre for Plant Functional Genomics. The author has contributed to research in topics: Genome & Whole genome sequencing. The author has an hindex of 18, co-authored 22 publications receiving 15030 citations. Previous affiliations of Chris Duran include University of Queensland & University of Melbourne.
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Journal ArticleDOI
Geneious Basic
Matthew Kearse,Richard Moir,Amy Wilson,Steven Stones-Havas,Matthew Cheung,Shane Sturrock,Simon Buxton,Alex Cooper,Sidney Markowitz,Chris Duran,Tobias Thierer,Bruce Ashton,Peter Meintjes,Alexei J. Drummond +13 more
TL;DR: Geneious Basic has been designed to be an easy-to-use and flexible desktop software application framework for the organization and analysis of biological data, with a focus on molecular sequences and related data types.
Journal ArticleDOI
The genome of the mesopolyploid crop species Brassica rapa
Xiaowu Wang,Hanzhong Wang,Jun Wang,Jun Wang,Jun Wang,Rifei Sun,Jian Wu,Shengyi Liu,Yinqi Bai,Jeong-Hwan Mun,Ian Bancroft,Feng Cheng,Sanwen Huang,Xixiang Li,Wei Hua,Junyi Wang,Xiyin Wang,Xiyin Wang,Michael Freeling,J. Chris Pires,Andrew H. Paterson,Boulos Chalhoub,Bo Wang,Alice Hayward,Alice Hayward,Andrew G. Sharpe,Beom-Seok Park,Bernd Weisshaar,Binghang Liu,Bo Li,Bo Liu,Chaobo Tong,Chi Song,Chris Duran,Chris Duran,Chunfang Peng,Geng Chunyu,Chushin Koh,Chuyu Lin,David Edwards,David Edwards,Desheng Mu,Di Shen,Eleni Soumpourou,Fei Li,Fiona Fraser,Gavin C. Conant,Gilles Lassalle,Graham J.W. King,Guusje Bonnema,Haibao Tang,Haiping Wang,Harry Belcram,Heling Zhou,Hideki Hirakawa,Hiroshi Abe,Hui Guo,Hui Wang,Huizhe Jin,Isobel A. P. Parkin,Jacqueline Batley,Jacqueline Batley,Jeong-Sun Kim,Jérémy Just,Jianwen Li,Jiaohui Xu,Jie Deng,Jin A Kim,Jingping Li,Jingyin Yu,Jinling Meng,Jinpeng Wang,Jiumeng Min,Julie Poulain,Katsunori Hatakeyama,Kui Wu,Li Wang,Lu Fang,Martin Trick,Matthew G. Links,Meixia Zhao,Mina Jin,Nirala Ramchiary,Nizar Drou,Paul J. Berkman,Paul J. Berkman,Qingle Cai,Quanfei Huang,Ruiqiang Li,Satoshi Tabata,Shifeng Cheng,Shu Zhang,Shujiang Zhang,Shunmou Huang,Shusei Sato,Silong Sun,Soo-Jin Kwon,Su-Ryun Choi,Tae-Ho Lee,Wei Fan,Xiang Zhao,Xu Tan,Xun Xu,Yan Wang,Yang Qiu,Ye Yin,Yingrui Li,Yongchen Du,Yongcui Liao,Yong Pyo Lim,Yoshihiro Narusaka,Yupeng Wang,Zhenyi Wang,Zhenyu Li,Zhiwen Wang,Zhiyong Xiong,Zhonghua Zhang +116 more
TL;DR: The annotation and analysis of the draft genome sequence of Brassica rapa accession Chiifu-401-42, a Chinese cabbage, and used Arabidopsis thaliana as an outgroup for investigating the consequences of genome triplication, such as structural and functional evolution.
Journal ArticleDOI
Molecular Genetic Markers: Discovery, Applications, Data Storage and Visualisation
TL;DR: A review of automated methods for the discovery of Simple Sequence Repeats (SSRs) and Single Nucleotide Polymorphisms (SNPs) can be found in this paper.
Journal ArticleDOI
Discovering genetic polymorphisms in next-generation sequencing data
Michael Imelfort,Michael Imelfort,Chris Duran,Chris Duran,Jacqueline Batley,Jacqueline Batley,David Edwards,David Edwards +7 more
TL;DR: The recent advances in next-generation sequencing technology are described, together with preliminary approaches that can be applied for single nucleotide polymorphism discovery in plant species, to offer a means to identify and characterize the wealth of genetic polymorphisms underlying the vast phenotypic variation in biological systems.
Journal ArticleDOI
Sequencing and assembly of low copy and genic regions of isolated Triticum aestivum chromosome arm 7DS.
Paul J. Berkman,Adam Skarshewski,Michal T. Lorenc,Kaitao Lai,Chris Duran,Edmund Y. S. Ling,Jiri Stiller,Lars Smits,Michael Imelfort,Sahana Manoli,Megan McKenzie,Marie Kubaláková,Hana Šimková,Jacqueline Batley,Delphine Fleury,Jaroslav Doležel,David Edwards +16 more
TL;DR: The results suggest that the sequencing of isolated chromosome arms can provide valuable information of the gene content of wheat and is a step towards whole-genome sequencing and variation discovery in this important crop.