D
Daniel Lawson
Researcher at European Bioinformatics Institute
Publications - 35
Citations - 9142
Daniel Lawson is an academic researcher from European Bioinformatics Institute. The author has contributed to research in topics: Genome & Comparative genomics. The author has an hindex of 23, co-authored 31 publications receiving 8298 citations. Previous affiliations of Daniel Lawson include Wellcome Trust & Cold Spring Harbor Laboratory.
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Journal ArticleDOI
Genome sequence of Aedes aegypti, a major arbovirus vector
Vishvanath Nene,Jennifer R. Wortman,Daniel Lawson,Brian J. Haas,Chinnappa D. Kodira,Zhijian Jake Tu,Brendan J. Loftus,Zhiyong Xi,Karyn Megy,Manfred Grabherr,Quinghu Ren,Evgeny M. Zdobnov,Neil F. Lobo,Kathryn S. Campbell,Susan E. Brown,Maria de Fatima Bonaldo,Jingsong Zhu,Steven P. Sinkins,David G. Hogenkamp,Paolo Amedeo,Peter Arensburger,Peter W. Atkinson,Shelby L. Bidwell,Jim Biedler,Ewan Birney,Robert V. Bruggner,Javier Costas,Monique R. Coy,Jonathan Crabtree,Matt Crawford,Becky deBruyn,David DeCaprio,Karin Eiglmeier,Eric Eisenstadt,Hamza El-Dorry,William M. Gelbart,Suely Lopes Gomes,Martin Hammond,Linda Hannick,James R. Hogan,Michael H. Holmes,David M. Jaffe,J. Spencer Johnston,Ryan C. Kennedy,Hean Koo,Saul A. Kravitz,Evgenia V. Kriventseva,David Kulp,Kurt LaButti,Eduardo Lee,Song Li,Diane D. Lovin,Chunhong Mao,Evan Mauceli,Carlos Frederico Martins Menck,Jason R. Miller,Philip Montgomery,Akio Mori,Ana L. T. O. Nascimento,Horacio Naveira,Chad Nusbaum,Sinéad B. O'Leary,Joshua Orvis,Mihaela Pertea,Hadi Quesneville,Kyanne R. Reidenbach,Yu-Hui Rogers,Charles Roth,Jennifer R. Schneider,Michael C. Schatz,Martin Shumway,Mario Stanke,Eric O. Stinson,Jose M. C. Tubio,Janice P. Vanzee,Sergio Verjovski-Almeida,Doreen Werner,Owen White,Stefan Wyder,Qiandong Zeng,Qi Zhao,Yongmei Zhao,Catherine A. Hill,Alexander S. Raikhel,Marcelo B. Soares,Dennis L. Knudson,Norman H. Lee,James E. Galagan,Steven L. Salzberg,Ian T. Paulsen,George Dimopoulos,Frank H. Collins,Bruce W. Birren,Claire M. Fraser-Liggett,David W. Severson +94 more
TL;DR: A draft sequence of the genome of Aedes aegypti, the primary vector for yellow fever and dengue fever, which at approximately 1376 million base pairs is about 5 times the size of the genomes of the malaria vector Anopheles gambiae was presented in this paper.
Journal ArticleDOI
Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
Kanchon K. Dasmahapatra,James R. Walters,Adriana D. Briscoe,John W. Davey,Annabel Whibley,Nicola J. Nadeau,Aleksey V. Zimin,Daniel S.T. Hughes,Laura Ferguson,Simon H. Martin,Camilo Salazar,Camilo Salazar,James J. Lewis,Sebastian Adler,Seung-Joon Ahn,Dean A. Baker,Simon W. Baxter,Nicola Chamberlain,Ritika Chauhan,Brian A. Counterman,Tamas Dalmay,Lawrence E. Gilbert,Karl H.J. Gordon,David G. Heckel,Heather M. Hines,Katharina J. Hoff,Peter W. H. Holland,Emmanuelle Jacquin-Joly,Francis M. Jiggins,Robert T. Jones,Durrell D. Kapan,Durrell D. Kapan,Paul J. Kersey,Gerardo Lamas,Daniel Lawson,Daniel Mapleson,Luana S. Maroja,Arnaud Martin,Simon Moxon,William J. Palmer,Riccardo Papa,Alexie Papanicolaou,Yannick Pauchet,David A. Ray,Neil Rosser,Steven L. Salzberg,Megan A. Supple,Alison K. Surridge,Ayşe Tenger-Trolander,Heiko Vogel,Paul A. Wilkinson,Derek Wilson,James A. Yorke,Furong Yuan,Alexi Balmuth,Cathlene Eland,Karim Gharbi,Marian Thomson,Richard A. Gibbs,Yi Han,Joy Jayaseelan,Christie Kovar,Tittu Mathew,Donna M. Muzny,Fiona Ongeri,Ling-Ling Pu,Jiaxin Qu,Rebecca Thornton,Kim C. Worley,Yuanqing Wu,Mauricio Linares,Mark Blaxter,Richard H. ffrench-Constant,Mathieu Joron,Marcus R. Kronforst,Sean P. Mullen,Robert D. Reed,Steven E. Scherer,Stephen Richards,James Mallet,James Mallet,W. Owen McMillan,Chris D. Jiggins,Chris D. Jiggins +83 more
TL;DR: It is inferred that closely related Heliconius species exchange protective colour-pattern genes promiscuously, implying that hybridization has an important role in adaptive radiation.
Journal ArticleDOI
WormBase: a multi‐species resource for nematode biology and genomics
Todd W. Harris,Nansheng Chen,Fiona Cunningham,Marcela K. Tello-Ruiz,Igor Antoshechkin,Carol Bastiani,Tamberlyn Bieri,Darin Blasiar,Keith Bradnam,Juancarlos Chan,Chao-Kung Chen,Wen J. Chen,Paul H. Davis,Eimear E. Kenny,Ranjana Kishore,Daniel Lawson,Raymond Lee,Hans-Michael Müller,Cecilia Nakamura,Philip Ozersky,Andrei Petcherski,Anthony Rogers,Aniko Sabo,Erich M. Schwarz,Kimberly Van Auken,Qinghua Wang,Richard Durbin,John Spieth,Paul W. Sternberg,Lincoln Stein +29 more
TL;DR: The nearly complete genomic sequence and comparative analyses of the closely related species Caenorhabditis briggsae have been integrated into WormBase, including gene predictions, ortholog assignments and a new synteny viewer to display the relationships between the two species.
Journal ArticleDOI
The BioMart community portal: an innovative alternative to large, centralized data repositories
Damian Smedley,Syed Haider,Steffen Durinck,Luca Pandini,Paolo Provero,Paolo Provero,James E. Allen,Olivier Arnaiz,Mohammad Awedh,Richard Baldock,Giulia Barbiera,Philippe Bardou,Tim Beck,Andrew Blake,Merideth Bonierbale,Anthony J. Brookes,Gabriele Bucci,Iwan Buetti,Sarah W. Burge,Cédric Cabau,Joseph W. Carlson,Claude Chelala,Charalambos Chrysostomou,Davide Cittaro,Olivier Collin,Raul Cordova,Rosalind J. Cutts,Erik Dassi,Alex Di Genova,Anis Djari,Anthony Esposito,Heather Estrella,Eduardo Eyras,Eduardo Eyras,Julio Fernandez-Banet,Simon A. Forbes,Robert C. Free,Takatomo Fujisawa,Emanuela Gadaleta,Jose Manuel Garcia-Manteiga,David Goodstein,Kristian Gray,José Afonso Guerra-Assunção,Bernard Haggarty,Dong Jin Han,Byung Woo Han,Todd W. Harris,Jayson Harshbarger,Robert K. Hastings,Richard D. Hayes,Claire Hoede,Shen Hu,Zhi-Liang Hu,Lucie N. Hutchins,Zhengyan Kan,Hideya Kawaji,Aminah Keliet,Arnaud Kerhornou,Sunghoon Kim,Rhoda Kinsella,Christophe Klopp,Lei Kong,Daniel Lawson,Dejan Lazarevic,Ji Hyun Lee,Thomas Letellier,Chuan-Yun Li,Pietro Liò,Chu Jun Liu,Jie Luo,Alejandro Maass,Jérôme Mariette,Thomas Maurel,Stefania Merella,Azza M. Mohamed,François Moreews,Ibounyamine Nabihoudine,Nelson Ndegwa,Céline Noirot,Cristian Perez-Llamas,Michael Primig,Alessandro Quattrone,Hadi Quesneville,Davide Rambaldi,James M. Reecy,Michela Riba,Steven Rosanoff,Amna A. Saddiq,Elisa Salas,Olivier Sallou,Rebecca Shepherd,Reinhard Simon,Linda Sperling,William Spooner,Daniel M. Staines,Delphine Steinbach,Kevin R. Stone,Elia Stupka,Jon W. Teague,Abu Z. Dayem Ullah,Jun Wang,Doreen Ware,Marie Wong-Erasmus,Ken Youens-Clark,Amonida Zadissa,Shi Jian Zhang,Arek Kasprzyk,Arek Kasprzyk +107 more
TL;DR: The latest version of the BioMart Community Portal comes with many new databases that have been created by the ever-growing community and comes with better support and extensibility for data analysis and visualization tools.
Journal ArticleDOI
VectorBase: an updated bioinformatics resource for invertebrate vectors and other organisms related with human diseases
Gloria I. Giraldo-Calderón,Scott J. Emrich,Robert M. MacCallum,Gareth Maslen,Emmanuel Dialynas,Pantelis Topalis,Nicholas Ho,Sandra Gesing,Gregory R. Madey,Frank H. Collins,Daniel Lawson +10 more
TL;DR: Improvements to the resource and the set of tools available for interrogating and accessing BRC data are described including the integration of Web Apollo to facilitate community annotation and providing Galaxy to support user-based workflows.