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Showing papers by "David Baltimore published in 2004"


Journal ArticleDOI
01 Oct 2004-Cell
TL;DR: It is reported that mammalian Ryk, unlike the Drosophila Ryk homolog Derailed, functions as a coreceptor along with Frizzled for Wnt ligands, providing a link between Wnt and Dishevelled.

474 citations


Journal ArticleDOI
20 Aug 2004-Cell
TL;DR: It is shown that for genes with two κB sites, both are required for activity and the sequence affects which coactivators will form productive interactions with the bound NF-κB dimer, suggesting that binding sites may impart a specific configuration to bound transcription factors.

374 citations


Journal ArticleDOI
TL;DR: It is suggested that both type 1 and type 2 NF-kappaB pathways contribute to the gene expression and biological program unique for CD40 in B cell activation.
Abstract: B lymphocytes can be activated by many different stimuli. However, the mechanisms responsible for the signaling and functional specificities of individual stimuli remain to be elucidated. Here, we have compared the contribution of the type 1 (p50-dependent) and type 2 (p52-dependent) NF-kappaB activation pathways to cell survival, proliferation, homotypic aggregation, and specific gene regulation of murine primary B lymphocytes. Whereas lipopolysaccharide (LPS) and B cell activation factor (BAFF) mainly activate the type 1 or type 2 pathways, respectively, CD40 ligand (CD40L) strongly activates both. Rescue of spontaneous apoptosis is diminished in p52(-/-) B cells after BAFF stimulation and in p50(-/-)c-Rel(-/-) B cells after LPS stimulation. Interestingly, significant CD40-induced B cell survival is still observed even in p50(-/-)c-Rel(-/-)p65(-/+) B cells, which is correlated with the ability of CD40L to up-regulate Bcl-x(L) expression in these cells. CD40L- and LPS-induced B cell proliferation, as well as up-regulation of proliferation-related genes, however, are greatly reduced in c-Rel(-/-) and p50(-/-)c-Rel(-/-) B cells but are normal in p52(-/-) B cells. We have further demonstrated that both c-Rel and p52 are required for CD40-mediated B cell homotypic aggregation, which explains well why neither LPS nor BAFF has this function. Overall, our studies suggest that both type 1 and type 2 NF-kappaB pathways contribute to the gene expression and biological program unique for CD40 in B cell activation.

125 citations


Journal ArticleDOI
23 Jan 2004-Cell
TL;DR: It would emerge that developing B lymphocytes assemble immunoglobulin genes from widely scattered gene segments, using a somatic DNA rearrangement process known as V(D)J recombination, and that developing T cells play the same trick to assemble functional T cell receptor genes.

34 citations


Journal ArticleDOI
24 Sep 2004-Science
TL;DR: The scientific community in the United States—and in other nations as well—has expressed concern about the way in which decisions about scientific issues have been subjected to political tests by the Bush administration.
Abstract: I n various ways, the scientific community in the United States—and in other nations as well—has expressed concern about the way in which decisions about scientific issues have been subjected to political tests by the Bush administration. For example, the Union of Concerned Scientists (UCS), in

8 citations


Patent
22 Oct 2004
TL;DR: In this article, compositions, such as soluble Ryk polypeptides and agents that selectively bind Ryk, are provided to inhibit proliferation of a cell exhibiting, or predisposed to exhibiting, unregulated growth.
Abstract: Compositions, including, for example, soluble Ryk polypeptides and/or agents that selectively bind Ryk, are provided. Methods of using such agents or compositions also are provided, including, for example, methods of using such compositions to inhibit proliferation of a cell exhibiting, or predisposed to exhibiting, unregulated growth. In addition, methods of ameliorating a cancer in a subject are provided.

5 citations



Patent
22 Oct 2004
TL;DR: In this article, compositions, including soluble Ryk polypeptides and Wnt, that induce cell growth and/or differentiation, including neurite outgrowth and hematopoietic cell proliferation and differentiation are provided.
Abstract: Compositions, including, for example, soluble Ryk polypeptides and Wnt polypeptides, that induce cell growth and/or differentiation, including, for example, neurite outgrowth and hematopoietic cell proliferation and differentiation, are provided. Methods of using such compositions also are provided, including, for example, methods of using such compositions to induce neurite outgrowth (e.g., in a subject having a neuronal disorder). In addition, methods to identify agents that alter Ryk mediated signal transduction in a cell are provided.

2 citations


27 Feb 2004
TL;DR: A more interactive systematic scientific approach is proposed to best support the science, both preclinical and clinical, required to make progress through experimentation and, eventually, to a safe and effective HIV vaccine.
Abstract: As articulated in our policy forum and by Zinkernagel, the development of an HIV vaccine is one of the most complex scientific challenges that modern biomedical research is confronting. However, it is exactly because this effort will be so difficult, and because we recognize that there are few blueprints for how to go about creating successful vaccines for organisms that have the characteristics that Zinkernagel describes, that we have proposed a more interactive systematic scientific approach organized to best support the science, both preclinical and clinical, required to make progress through experimentation. We strongly believe that basic scientific research should be conducted in coordination with well-planned clinical trials, in an iterative process that leads to incremental increase in knowledge and, eventually, to a safe and effective HIV vaccine. We do not believe that “hygienic measures, sufficient nutrition, chemotherapeutic agents … and serious … epidemiological surveys and prevention programs” alone will stop the HIV pandemic, especially in the poorest countries of the world, where 95% of all HIV infections are occurring. An HIV vaccine would be a powerful complement to these interventions and is essential to worldwide control of the pandemic. We, therefore, feel responsible to harness the power of science to accelerate its development.

2 citations