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Donghan M. Yang

Bio: Donghan M. Yang is an academic researcher from University of Texas Southwestern Medical Center. The author has contributed to research in topics: Extracellular & Intracellular. The author has an hindex of 1, co-authored 1 publications receiving 44 citations. Previous affiliations of Donghan M. Yang include Washington University in St. Louis.

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TL;DR: The intracellular water preexchange lifetime, τi, the “average residence time” of water, in the intrACEllular milieu of neurons and astrocytes is determined.
Abstract: Purpose To determine the intracellular water preexchange lifetime, τi, the “average residence time” of water, in the intracellular milieu of neurons and astrocytes. The preexchange lifetime is important for modeling a variety of MR data sets, including relaxation, diffusion-sensitive, and dynamic contrast–enhanced data sets. Methods Herein, τi in neurons and astrocytes is determined in a microbead-adherent, cultured cell system. In concert with thin-slice selection, rapid flow of extracellular media suppresses extracellular signal, allowing determination of the transcytolemmal-exchange-dominated, intracellular T1. With this knowledge, and that of the intracellular T1 in the absence of exchange, τi can be derived. Results Under normal culture conditions, τi for neurons is 0.75 ± 0.05 s versus 0.57 ± 0.03 s for astrocytes. Both neuronal and astrocytic τis decrease within 30 min after the onset of oxygen-glucose deprivation, with the astrocytic τi showing a substantially greater decrease than the neuronal τi. Conclusions Given an approximate intra- to extracellular volume ratio of 4:1 in the brain, these data imply that, under normal physiological conditions, an MR experimental characteristic time of less than 0.012 s is required for a nonexchanging, two-compartment (intra- and extracellular) model to be valid for MR studies. This characteristic time shortens significantly (i.e., 0.004 s) under injury conditions. Magn Reson Med, 2017. © 2017 International Society for Magnetic Resonance in Medicine.

64 citations


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TL;DR: In this article, the authors review, systematize and discuss models of diffusion in neuronal tissue, by putting them into an overarching physical context of coarse-graining over an increasing diffusion length scale.
Abstract: We review, systematize and discuss models of diffusion in neuronal tissue, by putting them into an overarching physical context of coarse-graining over an increasing diffusion length scale. From this perspective, we view research on quantifying brain microstructure as occurring along three major avenues. The first avenue focusses on transient, or time-dependent, effects in diffusion. These effects signify the gradual coarse-graining of tissue structure, which occurs qualitatively differently in different brain tissue compartments. We show that transient effects contain information about the relevant length scales for neuronal tissue, such as the packing correlation length for neuronal fibers, as well as the degree of structural disorder along the neurites. The second avenue corresponds to the long-time limit, when the observed signal can be approximated as a sum of multiple nonexchanging anisotropic Gaussian components. Here, the challenge lies in parameter estimation and in resolving its hidden degeneracies. The third avenue employs multiple diffusion encoding techniques, able to access information not contained in the conventional diffusion propagator. We conclude with our outlook on future directions that could open exciting possibilities for designing quantitative markers of tissue physiology and pathology, based on methods of studying mesoscopic transport in disordered systems.

356 citations

Journal ArticleDOI
TL;DR: A general analytical and numerical framework for estimating intra‐ and extra‐neurite water fractions and diffusion coefficients, as well as neurite orientational dispersion, in each imaging voxel is developed, revealing hidden degeneracies in MRI parameter estimation for neuronal tissue.

180 citations

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TL;DR: A nontrivial diffusion MRI signal dependence on echo time (TE) in human white matter in vivo is reported and it is demonstrated that such TE dependence originates from compartment‐specific T2 values and is a promising “orthogonal measure” able to break the degeneracy in parameter estimation, and to yield important relaxation metrics robustly.

176 citations

Journal ArticleDOI
TL;DR: In this paper, a compartment-based model for apparent cell body (namely soma) and neurite density imaging (SANDI) using non-invasive diffusion-weighted MRI (DW-MRI) was introduced.

137 citations

Journal ArticleDOI
TL;DR: This review of recent literature that has applied and developed MRI‐based in vivo histology to probe the microstructure of the human neocortex, focusing specifically on myelin, iron, and neuronal fibre mapping finds applications such as cortical parcellation and investigation of cortical iron deposition with age are already contributing to the frontiers of knowledge in neuroscience.

104 citations