D
Donna C. Ferguson
Researcher at Memorial Sloan Kettering Cancer Center
Publications - 7
Citations - 118
Donna C. Ferguson is an academic researcher from Memorial Sloan Kettering Cancer Center. The author has contributed to research in topics: Gene & Tandem exon duplication. The author has an hindex of 3, co-authored 7 publications receiving 19 citations.
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Journal ArticleDOI
Enhanced specificity of clinical high-sensitivity tumor mutation profiling in cell-free DNA via paired normal sequencing using MSK-ACCESS.
A. Rose Brannon,Gowtham Jayakumaran,Monica Diosdado,Juber Patel,Anna Razumova,Yu Hu,Fanli Meng,Mohammad Haque,Justyna Sadowska,Brian J. Murphy,Tessara Baldi,Ian Johnson,Ryan Ptashkin,Maysun Hasan,Preethi Srinivasan,Anoop Balakrishnan Rema,Ivelise Rijo,Aaron Agarunov,Helen Won,Dilmi Perera,David N Brown,Aliaksandra Samoila,Xiaohong Jing,Erika Gedvilaite,Julie L. Yang,Dennis Stephens,Jenna-Marie Dix,Nicole DeGroat,Khedoudja Nafa,Aijazuddin Syed,Alan Li,Emily S. Lebow,Anita S. Bowman,Donna C. Ferguson,Ying Liu,Douglas A. Mata,Rohit Sharma,Soo-Ryum Yang,Tejus Bale,Jamal Benhamida,Jason C. Chang,Snjezana Dogan,Meera Hameed,Jaclyn F. Hechtman,Christine Moung,Dara S. Ross,Efsevia Vakiani,Chad M. Vanderbilt,Jinjuan Yao,Pedram Razavi,Lillian M. Smyth,Sarat Chandarlapaty,Gopa Iyer,Wassim Abida,James J. Harding,Benjamin A. Krantz,Eileen M. O'Reilly,Helena A. Yu,Bob T. Li,Charles M. Rudin,Luis A. Diaz,David B. Solit,Maria E. Arcila,Marc Ladanyi,Brian Loomis,Dana W.Y. Tsui,Michael F. Berger,Ahmet Zehir,Ryma Benayed +68 more
TL;DR: MSK-ACCESS as mentioned in this paper is an NGS assay for detection of very low frequency somatic alterations in 129 genes and achieved 92% sensitivity in de-novo mutation calling down to 0.5% allele frequency and 99% for a priori mutation profiling.
Journal ArticleDOI
Structure-function analysis of oncogenic EGFR Kinase Domain Duplication reveals insights into activation and a potential approach for therapeutic targeting
Zhenfang Du,Benjamin P. Brown,Soyeon Kim,Donna C. Ferguson,Dean Pavlick,Gowtham Jayakumaran,Ryma Benayed,Jean-Nicolas Gallant,Yun-Kai Zhang,Yingjun Yan,Monica Red-Brewer,Siraj M. Ali,Alexa B. Schrock,Ahmet Zehir,Marc Ladanyi,Adam W. Smith,Jens Meiler,Christine M. Lovly +17 more
TL;DR: In this paper, the prevalence of ERBB family KDDs across multiple human cancers and evaluate the functional biochemistry of EGFR-KDD as it relates to pathogenesis and potential therapeutic intervention.
Journal ArticleDOI
Genetic and epigenetic landscape of IDH-wildtype glioblastomas with FGFR3 - TACC3 fusions
Douglas A. Mata,Jamal Benhamida,Andrew L. Lin,Chad M. Vanderbilt,Soo-Ryum Yang,Liliana Villafania,Donna C. Ferguson,Philip Jonsson,Alexandra Miller,Viviane Tabar,Cameron Brennan,Nelson S Moss,Martin Sill,Ryma Benayed,Ingo K. Mellinghoff,Marc K. Rosenblum,Maria E. Arcila,Marc Ladanyi,Tejus Bale +18 more
TL;DR: F3T3-positive GBMs exhibit distinct biological features, underscoring the importance of pursuing molecular studies prior to clinical trial enrollment and targeted treatment, and their impact on survival in 906 IDH-wildtype GBM patients.
Posted ContentDOI
Enhanced specificity of high sensitivity somatic variant profiling in cell-free DNA via paired normal sequencing: design, validation, and clinical experience of the MSK-ACCESS liquid biopsy assay
Angela Rose Brannon,Gowtham Jayakumaran,Monica Diosdado,Juber Patel,Anna Razumova,Yu Hu,Fanli Meng,Mohammad Haque,Justyna Sadowska,Brian J. Murphy,Tessara Baldi,Ian Johnson,Ryan Ptashkin,Maysun Hasan,Preethi Srinivasan,Anoop Balakrishnan Rema,Ivelise Rijo,Aaron Agarunov,Helen Won,Dilmi Perera,David N Brown,Aliaksandra Samoila,Xiaohong Jing,Erika Gedvilaite,Julie L. Yang,Dennis Stephens,Jenna-Marie Dix,Nicole DeGroat,Khedoudja Nafa,Aijazuddin Syed,Alan Li,Emily S. Lebow,Anita S. Bowman,Donna C. Ferguson,Ying Liu,Douglas A. Mata,Rohit Sharma,Soo-Ryum Yang,Tejus Bale,Jamal Benhamida,Jason C. Chang,Snjezana Dogan,Meera Hameed,Jaclyn F. Hechtman,Christine Moung,Dara S. Ross,Efsevia Vakiani,Chad M. Vanderbilt,JinJuan Yao,Pedram Razavi,Lillian M. Smyth,Sarat Chandarlapaty,Gopa Iyer,Wassim Abida,James J. Harding,Benjamin A. Krantz,Eileen M. O'Reilly,Helena A. Yu,Bob T. Li,Charles M. Rudin,Luis A. Diaz,David B. Solit,Maria E. Arcila,Marc Ladanyi,Brian Houck-Loomis,Dana Tsui,Michael F. Berger,Ahmet Zehir,Ryma Benayed +68 more
TL;DR: The experience illustrates the importance of analyzing a matched normal sample when interpreting cfDNA results and highlights the potential of cfDNA profiling to guide treatment selection, monitor treatment response, and identify mechanisms of treatment resistance.
Journal ArticleDOI
Androgen receptor splice variant-7 in breast cancer: clinical and pathologic correlations
Donna C. Ferguson,Douglas A. Mata,Timothy Ky. Tay,Tiffany A. Traina,Ayca Gucalp,Sarat Chandarlapaty,Timothy M. D'Alfonso,Edi Brogi,Kerry Mullaney,Marc Ladanyi,Maria E. Arcila,Ryma Benayed,Dara S. Ross +12 more
TL;DR: In this paper, the authors assessed the prevalence and clinicopathologic features associated with AR-V7 in a large BC cohort and concluded that positive AR IHC and apocrine morphology are pathologic features that may indicate testing for ARV7 is warranted in both primary and metastatic BC in the appropriate clinical context.