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Donna K. Slonim
Researcher at Tufts University
Publications - 96
Citations - 24451
Donna K. Slonim is an academic researcher from Tufts University. The author has contributed to research in topics: Gene expression profiling & Genome. The author has an hindex of 36, co-authored 92 publications receiving 23749 citations. Previous affiliations of Donna K. Slonim include National Institutes of Health & Pfizer.
Papers
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Journal ArticleDOI
Molecular classification of cancer: class discovery and class prediction by gene expression monitoring.
Todd R. Golub,Todd R. Golub,Donna K. Slonim,Pablo Tamayo,Christine Huard,Michelle Gaasenbeek,Jill P. Mesirov,Hilary A. Coller,Mignon L. Loh,James R. Downing,Michael A. Caligiuri,Clara D. Bloomfield,Eric S. Lander +12 more
TL;DR: A generic approach to cancer classification based on gene expression monitoring by DNA microarrays is described and applied to human acute leukemias as a test case and suggests a general strategy for discovering and predicting cancer classes for other types of cancer, independent of previous biological knowledge.
Journal ArticleDOI
Interpreting patterns of gene expression with self-organizing maps: Methods and application to hematopoietic differentiation
Pablo Tamayo,Donna K. Slonim,Jill P. Mesirov,Qing Zhu,Sutisak Kitareewan,Ethan Dmitrovsky,Eric S. Lander,Todd R. Golub,Todd R. Golub +8 more
TL;DR: In this article, the application of self-organizing maps, a type of mathematical cluster analysis that is particularly well suited for recognizing and classifying features in complex, multidi-mensional data, is described.
Journal ArticleDOI
A gene map of the human genome
Gregory D. Schuler,Mark S. Boguski,Elizabeth A. Stewart,Lincoln Stein,Gabor Gyapay,Kate Rice,Robert E. White,P. Rodriguez-Tomé,Amita Aggarwal,Eva Bajorek,S. Bentolila,B. B. Birren,Adam Butler,Andrew B. Castle,N. Chiannilkulchai,Angela M. Chu,C M Clee,Sid Cowles,P. J. R. Day,T. Dibling,N. Drouot,Ian Dunham,Simone Duprat,C. East,C A Edwards,Jun Fan,Nicole Y. Fang,Cécile Fizames,Christine Garrett,L. Green,David Hadley,Midori A. Harris,Paul Harrison,Shannon T. Brady,Andrew A. Hicks,E. Holloway,L. Hui,S. Hussain,C. Louis-Dit-Sully,J. Ma,A. MacGilvery,Christopher Mader,A. Maratukulam,Tara C. Matise,K. B. McKusick,Jean Morissette,Andrew J. Mungall,Delphine Muselet,H. C. Nusbaum,David C. Page,Ammon B. Peck,Shanti M. Perkins,Mark Piercy,Fawn Qin,John Quackenbush,S A Ranby,Tim Reif,Steve Rozen,C. Sanders,X. She,James Silva,Donna K. Slonim,Carol Soderlund,W.-L. Sun,P. Tabar,T. Thangarajah,Nathalie Vega-Czarny,Douglas Vollrath,S. Voyticky,T. E. Wilmer,Xiao-Yu Wu,Mark Raymond Adams,Charles Auffray,Nicole A.R. Walter,Rhonda Brandon,Anindya Dehejia,Peter N. Goodfellow,R. Houlgatte,James R. Hudson,Susan E. Ide,K. R. Iorio,Wha‐Young Lee,N. Seki,Takahiro Nagase,K. Ishikawa,N. Nomura,Cheryl Phillips,Mihael H. Polymeropoulos,Mina Sandusky,Karin Schmitt,Richard Berry,K. Swanson,R. Torres,J. C. Venter,James M. Sikela,Jacques S. Beckmann,Jean Weissenbach,Richard M. Myers,David R. Cox,Michael R. James,David Bentley,Panos Deloukas,Eric S. Lander,Thomas J. Hudson,Thomas J. Hudson +104 more
TL;DR: The gene map unifies the existing genetic and physical maps with the nucleotide and protein sequence databases in a fashion that should speed the discovery of genes underlying inherited human disease.
Journal ArticleDOI
An STS-Based Map of the Human Genome
Thomas J. Hudson,Lincoln D. Stein,Sebastian S. Gerety,Junli Ma,Andrew B. Castle,James Silva,Donna K. Slonim,Rafael Baptista,Leonid Kruglyak,Shu-Hua Xu,Xintong Hu,Angela M. E. Colbert,Carl Rosenberg,Mary Pat Reeve-Daly,Steve Rozen,Lester Hui,Xiaoyun Wu,Christina Vestergaard,Kimberly M. Wilson,Jane S. Bae,Shanak Maitra,Soula Ganiatsas,Cheryl A. Evans,Margaret M. DeAngelis,Kimberly A. Ingalls,Robert Nahf,Lloyd T. Horton,Michele Oskin Anderson,Alville Collymore,Wenjuan Ye,Vardouhie Kouyoumjian,Irena S. Zemsteva,James P. Tam,Richard Devine,Dorothy F. Courtney,Michelle Turner Renaud,Huy Nguyen,Tara J. O'Connor,Cécile Fizames,Sabine Fauré,Gabor Gyapay,Colette Dib,Jean Morissette,James B. Orlin,Bruce W. Birren,Nathan Goodman,Jean Weissenbach,Trevor Hawkins,Simon J. Foote,David C. Page,Eric S. Lander +50 more
TL;DR: A physical map has been constructed of the human genome containing 15,086 sequence-tagged sites (STSs), with an average spacing of 199 kilobases, anchored by the radiation hybrid and genetic maps.
Journal ArticleDOI
A Physical Map of 30,000 Human Genes
Panos Deloukas,Gregory D. Schuler,G. Gyapay,E. M. Beasley,Carol Soderlund,P. Rodriguez-Tomé,L. Hui,Tara C. Matise,K. B. McKusick,Jacques S. Beckmann,S. Bentolila,M.-T. Bihoreau,B. B. Birren,J. Browne,Adam Butler,A. B. Castle,N. Chiannilkulchai,C. Clee,P. J. R. Day,Anindya Dehejia,T. Dibling,N. Drouot,S. Duprat,C. Fizames,Sidney W. Fox,S. Gelling,L. Green,Paul Harrison,R. Hocking,E. Holloway,Sarah E. Hunt,S. Keil,Philip Lijnzaad,C. Louis-Dit-Sully,Jianpeng Ma,A. Mendis,J.H. Miller,J. Morissette,D. Muselet,H. C. Nusbaum,A. Peck,Steve Rozen,D. Simon,Donna K. Slonim,R. Staples,L. D. Stein,E. A. Stewart,Marc A. Suchard,T. Thangarajah,N. Vega-Czarny,Caleb Webber,Xufeng S. Wu,James R. Hudson,Charles Auffray,N. Nomura,James M. Sikela,Mihael H. Polymeropoulos,M. R. James,Eric S. Lander,Thomas J. Hudson,Richard M. Myers,D. R. Cox,Jean Weissenbach,Mark S. Boguski,D. R. Bentley +64 more
TL;DR: A map of 30,181 human gene-based markers was assembled and integrated with the current genetic map by radiation hybrid mapping, which contains nearly twice as many genes as the previous release and is twofold to threefold more accurate than the previous version.