E
Eric U. Selker
Researcher at University of Oregon
Publications - 148
Citations - 21656
Eric U. Selker is an academic researcher from University of Oregon. The author has contributed to research in topics: Neurospora crassa & DNA methylation. The author has an hindex of 62, co-authored 146 publications receiving 20246 citations. Previous affiliations of Eric U. Selker include University of Kansas & Stanford University.
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Journal ArticleDOI
Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers
Nathan A. Baird,Paul D. Etter,Tressa S. Atwood,Mark Currey,Anthony L. Shiver,Zachary A. Lewis,Eric U. Selker,William A. Cresko,Eric A. Johnson +8 more
TL;DR: The sequencing of restriction-site associated DNA (RAD) tags was described, which identified more than 13,000 SNPs, and three traits in two model organisms were mapped, using less than half the capacity of one Illumina sequencing run.
Journal ArticleDOI
The genome sequence of the filamentous fungus Neurospora crassa
James E. Galagan,Sarah E. Calvo,Katherine A. Borkovich,Eric U. Selker,Nick O. Read,David B. Jaffe,William Fitzhugh,Li-Jun Ma,Serge Smirnov,Seth Purcell,Bushra Rehman,Timothy Elkins,Reinhard Engels,Shunguang Wang,Cydney B. Nielsen,Jonathan Butler,Matthew G. Endrizzi,Dayong Qui,Peter Ianakiev,Deborah Bell-Pedersen,Mary Anne Nelson,Margaret Werner-Washburne,Claude P. Selitrennikoff,John A. Kinsey,Edward L. Braun,Alex Zelter,Alex Zelter,Ulrich Schulte,Gregory O. Kothe,Gregory Jedd,Werner Mewes,Chuck Staben,Edward M. Marcotte,David Greenberg,Alice Roy,Karen Foley,Jerome Naylor,Nicole Stange-Thomann,Robert Barrett,Sante Gnerre,Michael Kamal,Manolis Kamvysselis,Evan Mauceli,Cord Bielke,Stephen Rudd,Dmitrij Frishman,Svetlana Krystofova,Carolyn G. Rasmussen,Robert L. Metzenberg,David D. Perkins,Scott Kroken,Carlo Cogoni,Giuseppe Macino,David E. A. Catcheside,Weixi Li,Robert J. Pratt,Stephen A. Osmani,Colin P.C. DeSouza,Louise Glass,Marc J. Orbach,J. Andrew Berglund,Rodger B. Voelker,Oded Yarden,Michael Plamann,Stephan Seiler,Jay C. Dunlap,Alan Radford,Rodolfo Aramayo,Donald O. Natvig,Lisa A. Alex,Gertrud Mannhaupt,Daniel J. Ebbole,Michael Freitag,Ian T. Paulsen,Matthew S. Sachs,Eric S. Lander,Chad Nusbaum,Bruce W. Birren +77 more
TL;DR: A high-quality draft sequence of the N. crassa genome is reported, suggesting that RIP has had a profound impact on genome evolution, greatly slowing the creation of new genes through genomic duplication and resulting in a genome with an unusually low proportion of closely related genes.
Journal ArticleDOI
Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae
James E. Galagan,Sarah E. Calvo,Christina A. Cuomo,Li-Jun Ma,Jennifer R. Wortman,Serafim Batzoglou,Su-In Lee,Meray Baştürkmen,Christina C. Spevak,John Clutterbuck,Vladimir V. Kapitonov,Jerzy Jurka,Claudio Scazzocchio,Mark L. Farman,Jonathan Butler,Seth Purcell,Steve Harris,Gerhard H. Braus,Oliver W. Draht,Silke Busch,Christophe d'Enfert,Christiane Bouchier,Gustavo H. Goldman,Deborah Bell-Pedersen,Sam Griffiths-Jones,John H. Doonan,Jae-Hyuk Yu,Kay Vienken,Arnab Pain,Michael Freitag,Eric U. Selker,David B. Archer,Miguel A. Peñalva,Berl R. Oakley,Michelle Momany,Toshihiro Tanaka,Toshitaka Kumagai,Kiyoshi Asai,Masayuki Machida,William C. Nierman,David W. Denning,Mark X. Caddick,Michael J. Hynes,Mathieu Paoletti,Reinhard Fischer,Reinhard Fischer,Bruce L. Miller,Paul S. Dyer,Matthew S. Sachs,Stephen A. Osmani,Bruce W. Birren +50 more
TL;DR: The aspergilli comprise a diverse group of filamentous fungi spanning over 200 million years of evolution, and a comparative study with Aspergillus fumigatus and As pergillus oryzae, used in the production of sake, miso and soy sauce, provides new insight into eukaryotic genome evolution and gene regulation.
Journal ArticleDOI
A Histone H3 Methyltransferase Controls DNA Methylation in Neurospora Crassa
Hisashi Tamaru,Eric U. Selker +1 more
TL;DR: It is demonstrated that recombinant DIM-5 protein specifically methylates histone H3 and that replacement of lysine 9 in hist one H3 with either a leucine or an arginine phenocopies the dim-5 mutation, concluding that DNA methylation depends on histone methylation.
Journal ArticleDOI
A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes
Richard J. Roberts,Marlene Belfort,Timothy H. Bestor,Ashok S. Bhagwat,Thomas A. Bickle,Jurate Bitinaite,Robert Blumenthal,Sergey Kh. Degtyarev,David T. F. Dryden,Kevin Dybvig,Keith Firman,Elizaveta S. Gromova,Richard I. Gumport,Stephen E. Halford,Stanley Hattman,Joseph Heitman,David P. Hornby,Arvydas Janulaitis,Albert Jeltsch,Jytte Josephsen,Antal Kiss,Todd R. Klaenhammer,Ichizo Kobayashi,Huimin Kong,Detlev H. Krüger,Sanford A. Lacks,Martin G. Marinus,Michiko Miyahara,Richard D. Morgan,Noreen E. Murray,Valakunja Nagaraja,Andrzej Piekarowicz,Alfred Pingoud,Elisabeth A. Raleigh,Desirazu N. Rao,Norbert O. Reich,Repin Vladimir E,Eric U. Selker,Pang-Chui Shaw,Daniel C. Stein,Barry L. Stoddard,Waclaw Szybalski,Thomas A. Trautner,James L. Van Etten,Jorge M. B. Vítor,Geoffrey G. Wilson,Shuang Yong Xu +46 more
TL;DR: In this article, a nomenclature for restriction endonucleases, DNA methyltransferases, homing endon nucleases and related genes and gene products is described.