Francesco Bartolucci

Bio: Francesco Bartolucci is an academic researcher from University of Perugia. The author has contributed to research in topics: Latent class model & Expectation–maximization algorithm. The author has an hindex of 31, co-authored 214 publications receiving 2629 citations. Previous affiliations of Francesco Bartolucci include University of Urbino.

Bedside sonography assessment of extravascular lung water increase after major pulmonary resection in non-small cell lung cancer patients.

Abstract: Background: Extra vascular lung water (EVLW) following pulmonary resection increases due to fluid infusion and rises in capillary surface and permeability of the alveolar capillary membranes. EVLW increase clinically correlates to pulmonary oedema and it may generate impairments of gas exchanges and acute lung injury. An early and reliable assessment of postoperative EVLW, especially following major pulmonary resection, is useful in terms of reducing the risk of postoperative complications. The currently used methods, though satisfying these criteria, tend to be invasive and cumbersome and these factors might limit its use. The presence and burden of EVLW has been reported to correlate with sonographic B-line artefacts (BLA) assessed by lung ultrasound (LUS). This observational study investigated if bedside LUS could detect EVLW increases after major pulmonary resection. Due to the clinical association between EVLW increase and impairment of gas exchange, secondary aims of the study included investigating for associations between any observed EVLW increases and both respiratory ratio (PaO2/FiO2) and fluid retention, measured by brain natriuretic peptide (BNP). Methods: Overall, 74 major pulmonary resection patients underwent bedside LUS before surgery and at postoperative days 1 and 4, in the inviolate hemithorax which were divided into four quadrants. BLA were counted with a four-level method. The respiratory ratio PaO2/FiO2 and fluid retention were both assessed. Results: BLA resulted being increased at postoperative day 1 (OR 9.25; 95% CI, 5.28–16.20; P<0.0001 vs. baseline), and decreased at day 4 (OR 0.50; 95% CI, 0.31–0.80; P=0.004 vs. day 1). Moreover, the BLA increase was associated with both increased BNP (OR 1.005; 95% CI, 1.003–1.008; P<0.0001) and body weight (OR 1.040; 95% CI, 1.008–1.073; P=0.015). Significant inverse correlations were observed between the BLA values and the PaO 2 /FiO 2 respiratory ratios. Conclusions: Our results suggest that LUS, due to its non-invasiveness, affordability and capacity to detect increases in EVLW, might be useful in better managing postoperative patients.

A Nonparametric Multidimensional Latent Class IRT Model in a Bayesian Framework.

Abstract: We propose a nonparametric item response theory model for dichotomously-scored items in a Bayesian framework. The model is based on a latent class (LC) formulation, and it is multidimensional, with dimensions corresponding to a partition of the items in homogenous groups that are specified on the basis of inequality constraints among the conditional success probabilities given the latent class. Moreover, an innovative system of prior distributions is proposed following the encompassing approach, in which the largest model is the unconstrained LC model. A reversible-jump type algorithm is described for sampling from the joint posterior distribution of the model parameters of the encompassing model. By suitably post-processing its output, we then make inference on the number of dimensions (i.e., number of groups of items measuring the same latent trait) and we cluster items according to the dimensions when unidimensionality is violated. The approach is illustrated by two examples on simulated data and two applications based on educational and quality-of-life data.

Bayesian inference through encompassing priors and importance sampling for a class of marginal models for categorical data

Abstract: We develop a Bayesian approach for selecting the model which is the most supported by the data within a class of marginal models for categorical variables formulated through equality and/or inequality constraints on generalised logits (local, global, continuation or reverse continuation), generalised log-odds ratios and similar higher-order interactions. For each constrained model, the prior distribution of the model parameters is formulated following the encompassing prior approach. Then, model selection is performed by using Bayes factors which are estimated by an importance sampling method. The approach is illustrated through three applications involving some datasets, which also include explanatory variables. In connection with one of these examples, a sensitivity analysis to the prior specification is also considered.

Ranking scientific journals via latent class models for polytomous item response data

Abstract: Summary We propose a model-based strategy for ranking scientific journals starting from a set of observed bibliometric indicators that represent imperfect measures of the unobserved ‘value’ of a journal. After discretizing the available indicators, we estimate an extended latent class model for polytomous item response data and use the estimated model to cluster journals. We illustrate our approach by using the data from the Italian research evaluation exercise that was carried out for the period 2004–2010, focusing on the set of journals that are considered relevant for the subarea statistics and financial mathematics. Using four bibliometric indicators (IF, IF5, AIS and the h-index), some of which are not available for all journals, and the information contained in a set of covariates, we derive a complete ordering of these journals. We show that the methodology proposed is relatively simple to implement, even when the aim is to cluster journals into a small number of ordered groups of a fixed size. We also analyse the robustness of the obtained ranking with respect to different discretization rules.

Estimation and Inference in Econometrics

Abstract: Offering a unifying theoretical perspective not readily available in any other text, this innovative guide to econometrics uses simple geometrical arguments to develop students' intuitive understanding of basic and advanced topics, emphasizing throughout the practical applications of modern theory and nonlinear techniques of estimation. One theme of the text is the use of artificial regressions for estimation, reference, and specification testing of nonlinear models, including diagnostic tests for parameter constancy, serial correlation, heteroscedasticity, and other types of mis-specification. Explaining how estimates can be obtained and tests can be carried out, the authors go beyond a mere algebraic description to one that can be easily translated into the commands of a standard econometric software package. Covering an unprecedented range of problems with a consistent emphasis on those that arise in applied work, this accessible and coherent guide to the most vital topics in econometrics today is indispensable for advanced students of econometrics and students of statistics interested in regression and related topics. It will also suit practising econometricians who want to update their skills. Flexibly designed to accommodate a variety of course levels, it offers both complete coverage of the basic material and separate chapters on areas of specialized interest.

Approximate Bayesian inference for latent Gaussian models by using integrated nested Laplace approximations

Abstract: Structured additive regression models are perhaps the most commonly used class of models in statistical applications. It includes, among others, (generalized) linear models, (generalized) additive models, smoothing spline models, state space models, semiparametric regression, spatial and spatiotemporal models, log-Gaussian Cox processes and geostatistical and geoadditive models. We consider approximate Bayesian inference in a popular subset of structured additive regression models, latent Gaussian models, where the latent field is Gaussian, controlled by a few hyperparameters and with non-Gaussian response variables. The posterior marginals are not available in closed form owing to the non-Gaussian response variables. For such models, Markov chain Monte Carlo methods can be implemented, but they are not without problems, in terms of both convergence and computational time. In some practical applications, the extent of these problems is such that Markov chain Monte Carlo sampling is simply not an appropriate tool for routine analysis. We show that, by using an integrated nested Laplace approximation and its simplified version, we can directly compute very accurate approximations to the posterior marginals. The main benefit of these approximations is computational: where Markov chain Monte Carlo algorithms need hours or days to run, our approximations provide more precise estimates in seconds or minutes. Another advantage with our approach is its generality, which makes it possible to perform Bayesian analysis in an automatic, streamlined way, and to compute model comparison criteria and various predictive measures so that models can be compared and the model under study can be challenged.

Handbook of Markov Chain Monte Carlo

Abstract: Foreword Stephen P. Brooks, Andrew Gelman, Galin L. Jones, and Xiao-Li Meng Introduction to MCMC, Charles J. Geyer A short history of Markov chain Monte Carlo: Subjective recollections from in-complete data, Christian Robert and George Casella Reversible jump Markov chain Monte Carlo, Yanan Fan and Scott A. Sisson Optimal proposal distributions and adaptive MCMC, Jeffrey S. Rosenthal MCMC using Hamiltonian dynamics, Radford M. Neal Inference and Monitoring Convergence, Andrew Gelman and Kenneth Shirley Implementing MCMC: Estimating with confidence, James M. Flegal and Galin L. Jones Perfection within reach: Exact MCMC sampling, Radu V. Craiu and Xiao-Li Meng Spatial point processes, Mark Huber The data augmentation algorithm: Theory and methodology, James P. Hobert Importance sampling, simulated tempering and umbrella sampling, Charles J.Geyer Likelihood-free Markov chain Monte Carlo, Scott A. Sisson and Yanan Fan MCMC in the analysis of genetic data on related individuals, Elizabeth Thompson A Markov chain Monte Carlo based analysis of a multilevel model for functional MRI data, Brian Caffo, DuBois Bowman, Lynn Eberly, and Susan Spear Bassett Partially collapsed Gibbs sampling & path-adaptive Metropolis-Hastings in high-energy astrophysics, David van Dyk and Taeyoung Park Posterior exploration for computationally intensive forward models, Dave Higdon, C. Shane Reese, J. David Moulton, Jasper A. Vrugt and Colin Fox Statistical ecology, Ruth King Gaussian random field models for spatial data, Murali Haran Modeling preference changes via a hidden Markov item response theory model, Jong Hee Park Parallel Bayesian MCMC imputation for multiple distributed lag models: A case study in environmental epidemiology, Brian Caffo, Roger Peng, Francesca Dominici, Thomas A. Louis, and Scott Zeger MCMC for state space models, Paul Fearnhead MCMC in educational research, Roy Levy, Robert J. Mislevy, and John T. Behrens Applications of MCMC in fisheries science, Russell B. Millar Model comparison and simulation for hierarchical models: analyzing rural-urban migration in Thailand, Filiz Garip and Bruce Western

Education at a Glance

Abstract: A detailed review of the education sector in Australia as in the data provided by the 2006 edition of the OECD's annual publication, 'Education at a Glance' is presented. While the data has shown that in almost all OECD countries educational attainment levels are on the rise, with countries showing impressive gains in university qualifications, it also reveals that a large of share of young people still do not complete secondary school, which remains a baseline for successful entry into the labour market.