http://www.eecs.ucf.edu/~dcm/Teaching/COT4810-Spring2011/Literature/SensorNetworksSurvey.pdf

Wireless sensor networks: a survey

https://www.genome.gov/Pages/Newsroom/Webcasts/2010ScienceReportersWorkshop/Panel5_integrated_genome_analysis_subtypes_of_glio.pdf

Integrated Genomic Analysis Identifies Clinically Relevant Subtypes of Glioblastoma Characterized by Abnormalities in PDGFRA, IDH1, EGFR, and NF1

https://www.science.smith.edu/~jcardell/Courses/EGR328/Readings/WSNSurvey2.pdf

Wireless sensor network survey

Infiltrating stromal and immune cells form the major fraction of normal cells in tumour tissue and not only perturb the tumour signal in molecular studies but also have an important role in cancer biology. Here we describe 'Estimation of STromal and Immune cells in MAlignant Tumours using Expression data' (ESTIMATE)--a method that uses gene expression signatures to infer the fraction of stromal and immune cells in tumour samples. ESTIMATE scores correlate with DNA copy number-based tumour purity across samples from 11 different tumour types, profiled on Agilent, Affymetrix platforms or based on RNA sequencing and available through The Cancer Genome Atlas. The prediction accuracy is further corroborated using 3,809 transcriptional profiles available elsewhere in the public domain. The ESTIMATE method allows consideration of tumour-associated normal cells in genomic and transcriptomic studies. An R-library is available on https://sourceforge.net/projects/estimateproject/.

/pdf/inferring-tumour-purity-and-stromal-and-immune-cell-3qvnp398w9.pdf

Inferring tumour purity and stromal and immune cell admixture from expression data

The Cancer Genome Atlas Network recently cataloged recurrent genomic abnormalities in glioblastoma multiforme (GBM). We describe a robust gene expression-based molecular classification of GBM into Proneural, Neural, Classical, and Mesenchymal subtypes and integrate multidimensional genomic data to establish patterns of somatic mutations and DNA copy number. Aberrations and gene expression of EGFR, NF1, and PDGFRA/IDH1 each define the Classical, Mesenchymal, and Proneural subtypes, respectively. Gene signatures of normal brain cell types show a strong relationship between subtypes and different neural lineages. Additionally, response to aggressive therapy differs by subtype, with the greatest benefit in the Classical subtype and no benefit in the Proneural subtype. We provide a framework that unifies transcriptomic and genomic dimensions for GBM molecular stratification with important implications for future studies.

Wireless ad-hoc sensor networks will provide one of the missing connections between the Internet and the physical world One of the fundamental problems in sensor networks is the calculation of coverage Exposure is directly related to coverage in that it is a measure of how well an object, moving on an arbitrary path, can be observed by the sensor network over a period of timeIn addition to the informal definition, we formally define exposure and study its properties We have developed an efficient and effective algorithm for exposure calculation in sensor networks, specifically for finding minimal exposure paths The minimal exposure path provides valuable information about the worst case exposure-based coverage in sensor networks The algorithm works for any given distribution of sensors, sensor and intensity models, and characteristics of the network It provides an unbounded level of accuracy as a function of run time and storage We provide an extensive collection of experimental results and study the scaling behavior of exposure and the proposed algorithm for its calculation

/pdf/exposure-in-wireless-ad-hoc-sensor-networks-428bdvnits.pdf

Exposure in wireless Ad-Hoc sensor networks

Vehicular ad hoc networks (VANETs) are becoming the most promising research topic in intelligent transportation systems, because they provide information to deliver comfort and safety to both drivers and passengers. However, unique characteristics of VANETs make security, privacy, and trust management challenging issues in VANETs’ design. This survey article starts with the necessary background of VANETs, followed by a brief treatment of main security services, which have been well studied in other fields. We then focus on an in-depth review of anonymous authentication schemes implemented by five pseudonymity mechanisms. Because of the predictable dynamics of vehicles, anonymity is necessary but not sufficient to thwart tracking an attack that aims at the drivers’ location profiles. Thus, several location privacy protection mechanisms based on pseudonymity are elaborated to further protect the vehicles’ privacy and guarantee the quality of location-based services simultaneously. We also give a comprehensive analysis on various trust management models in VANETs. Finally, considering that current and near-future applications in VANETs are evaluated by simulation, we give a much-needed update on the latest mobility and network simulators as well as the integrated simulation platforms. In sum, this paper is carefully positioned to avoid overlap with existing surveys by filling the gaps and reporting the latest advances in VANETs while keeping it self-explained.

A Survey on Recent Advances in Vehicular Network Security, Trust, and Privacy

The growing class of portable systems, such as personal computing and communication devices, has resulted in a new set of system design requirements, mainly characterized by dominant importance of power minimization and design reuse. We develop the design methodology for the low power core-based real-time system-on-chip based on dynamically variable voltage hardware. The key challenge is to develop effective scheduling techniques that treat voltage as a variable to be determined, in addition to the conventional task scheduling and allocation. Our synthesis technique also addresses the selection of the processor core and the determination of the instruction and data cache size and configuration so as to fully exploit dynamically variable voltage hardware, which result in significantly lower power consumption for a set of target applications than existing techniques. The highlight of the proposed approach is the non-preemptive scheduling heuristic which results in solutions very close to optimal ones for many test cases. The effectiveness of the approach is demonstrated on a variety of modern industrial-strength multimedia and communication applications.

/pdf/power-optimization-of-variable-voltage-core-based-systems-3t2ngob941.pdf

Power optimization of variable voltage core-based systems

The growing class of portable systems, such as personal computing and communication devices, has resulted in a new set of system design requirements, mainly characterized by dominant importance of power minimization and design reuse. The energy efficiency of systems-on-a-chip (SOC) could be much improved if one were to vary the supply voltage dynamically at run time. We developed the design methodology for the low-power core-based real-time SOC based on dynamically variable voltage hardware. The key challenge is to develop effective scheduling techniques that treat voltage as a variable to be determined, in addition to the conventional task scheduling and allocation. Our synthesis technique also addresses the selection of the processor core and the determination of the instruction and data cache size and configuration so as to fully exploit dynamically variable voltage hardware, which results in significantly lower power consumption for a set of target applications than existing techniques. The highlight of the proposed approach is the nonpreemptive scheduling heuristic, which results in solutions very close to optimal ones for many test cases. The effectiveness of the approach is demonstrated on a variety of modern industrial strength multimedia and communication applications.

/pdf/power-optimization-of-variable-voltage-core-based-systems-1wflx47og5.pdf

Power optimization of variable-voltage core-based systems

The public key infrastructure-based authentication protocol provides basic security services for the vehicular ad hoc networks (VANETs). However, trust and privacy are still open issues due to the unique characteristics of VANETs. It is crucial to prevent internal vehicles from broadcasting forged messages while simultaneously preserving the privacy of vehicles against the tracking attacks. In this paper, we propose a blockchain-based anonymous reputation system (BARS) to establish a privacy-preserving trust model for VANETs. The certificate and revocation transparency is implemented efficiently with the proofs of presence and absence based on the extended blockchain technology. The public keys are used as pseudonyms in communications without any information about real identities for conditional anonymity. In order to prevent the distribution of forged messages, a reputation evaluation algorithm is presented relying on both direct historical interactions and indirect opinions about vehicles. A set of experiments is conducted to evaluate BARS in terms of security, validity, and performance, and the results show that BARS is able to establish a trust model with transparency, conditional anonymity, efficiency, and robustness for VANETs.

Gang Qu

Papers

Exposure in wireless Ad-Hoc sensor networks

A Survey on Recent Advances in Vehicular Network Security, Trust, and Privacy

Power optimization of variable voltage core-based systems

Power optimization of variable-voltage core-based systems

A Privacy-Preserving Trust Model Based on Blockchain for VANETs