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Gary B. Fogel
Researcher at Torrey Pines Institute for Molecular Studies
Publications - 97
Citations - 2609
Gary B. Fogel is an academic researcher from Torrey Pines Institute for Molecular Studies. The author has contributed to research in topics: Evolutionary computation & Population. The author has an hindex of 25, co-authored 93 publications receiving 2450 citations. Previous affiliations of Gary B. Fogel include University of California, Los Angeles & Aarhus University.
Papers
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Journal ArticleDOI
Prokaryotic Genome Size and SSU rDNA Copy Number: Estimation of Microbial Relative Abundance from a Mixed Population.
TL;DR: By surveying the literature, this compilation can be used to make reasonable estimates for a wide range of organisms in the calculation of relative abundance and a phylogenetic analysis is used to offer insights into the evolution of both genome size and SSU rDNA copy number.
Book
Evolutionary Computation In Bioinformatics
Gary B. Fogel,David Corne +1 more
TL;DR: This book offers a definitive resource to bridge the computer science and biology communities and offers industrial and academic researchers in computer science, biology, and bioinformatics an important resource for applying evolutionary computation.
Journal ArticleDOI
An approach for classification of highly imbalanced data using weighting and undersampling
TL;DR: The results demonstrate that the proposed selection technique improves the sensitivity compared to weighted support-vector machine and available results in the literature for the same datasets.
Proceedings ArticleDOI
Noisy optimization problems - a particular challenge for differential evolution?
TL;DR: It is demonstrated that standard methods of evolutionary optimization are able to outperform differential evolution on noisy problems when the fitness of candidate solutions approaches the fitness variance caused by the noise.
Journal ArticleDOI
HIV DNA Is Frequently Present within Pathologic Tissues Evaluated at Autopsy from Combined Antiretroviral Therapy-Treated Patients with Undetectable Viral Loads
Susanna L. Lamers,Rebecca Rose,Ekaterina Maidji,Melissa Agsalda-Garcia,David J. Nolan,Gary B. Fogel,Marco Salemi,Debra Leiolani Garcia,Paige M. Bracci,William H. Yong,Deborah Commins,Jonathan W. Said,Negar Khanlou,Charles H. Hinkin,Miguel Valdes Sueiras,Glenn E. Mathisen,Suzanne M. Donovan,Bruce Shiramizu,Cheryl A. Stoddart,Michael S. McGrath,Elyse J. Singer +20 more
TL;DR: It is substantiated that tissue-associated HIV is present despite cART and can inform future studies into HIV persistence, and additional studies are needed to determine if the HIV recovered from tissues promotes the pathogenesis of inflammatory diseases, such as HIV-associated neurocognitive disorders, cancer, and atherosclerosis.