J. A. Allen

Bio: J. A. Allen is an academic researcher. The author has contributed to research in topics: Phytodetritus & Population. The author has an hindex of 1, co-authored 1 publications receiving 472 citations.

Responses by benthic organisms to inputs of organic material to the ocean floor:a review.

Abstract: Most of the photosynthetically produced organic material reaching the ocean-floor is transported as settling particles, among which larger particles such as faecal pellets and macroaggregates (marine snow) are particularly important. Recent studies in the northeastern Atlantic have demonstrated that macroaggregates originating from the euphotic zone settle at a rate of approximately 100-150 m d -1 to form a deposit (phytodetritus) on the sediment surface. Bacteria and protozoa (flagellates and foraminifers) rapidly colonize and multiply on phytodetritus, while large deposit feeding animals ingest it. Other inputs, for example Sargassum , wood and vertebrate carcasses, also evoke a rapid response by benthic organisms. However, the taxa that respond depend on the form of the organic material. The intermittent or seasonally pulsed nature of phytodetritus and many other inputs regulate the population dynamics and reproductive cycles of some responding species. These are often opportunists that are able to utilize ephemeral food resources and, therefore, undergo rapid fluctuations in population density. In addition, the patchy distribution of much of the organic material deposited on the ocean-floor probably plays a major role in structuring deep-sea benthic ecosystems.

Ecology and Applications of Benthic Foraminifera

Abstract: In this volume John Murray investigates the ecological processes that control the distribution, abundance, and species diversity of benthic foraminifera in environments ranging from marsh to the deepest ocean. To interpret the fossil record it is necessary to have an understanding of the ecology of modern foraminifera and the processes operating after death leading to burial and fossilisation. This book presents the ecological background required to explain how fossil forms are used in dating rocks and reconstructing past environmental features including changes of sea level. It demonstrates how living foraminifera can be used to monitor modern-day environmental change. Ecology and Applications of Benthic Foraminifera presents a comprehensive and global coverage of the subject using all the available literature. It is supported by a website hosting a large database of additional ecological information (www.cambridge.org/0521828392) and will form an important reference for academic researchers and graduate students in Earth and Environmental Sciences.

The ecology of living (stained) deep-sea benthic foraminifera from the Sulu Sea

Abstract: The distribution of living (rose bengal stained) deep-sea benthic foraminifera was determined in the upper 20 cm of sediments of eight Soutar box cores taken from two depth transects (510-4515 m) in the thermospheric (> 10°C) Sulu Sea. Despite the uniformity of bottom water temperatures, salinities, and dissolved oxygen levels below 1000 m, significant faunal differences exist at different depths in the low-oxygen (∼1.25 mL/L below 1000 m) basin. The shallowest site (510 m) is dominated (> 10% of the calcareous fauna) by Cibicidoides, Uvigerina, (> 150 µm) and Bolivina (> 63 µm), while Siphonina is codominant with Cibicidoides and Uvigerina in the 1005-m core. The 2000-m cores are dominated by Cibicidoides, Gyroidinoides, and Oridorsalis, while Cibicidoides bradyi and Oridorsalis umbonatus dominate the 3000- and 4000-m cores. Infaunal assemblages of Valvulineria mexicana are found in the sediments of the 4515-m core. Relatively low bottom water oxygen values do not necessarily yield "typical low-oxygen taxa" such as Bolivina, Uvigerina, Chilostomella, Bulimina, and Globobulimina. Changes in the abundances of these taxa in fossil assemblages have been used as indicators of changes in ancient bottom water oxygen levels but may instead reflect organic carbon contents of the sediments. An examination of the vertical distributions of foraminiferal assemblages from the > 63-µm and > 150-µm fractions reveals that taxa have microhabitat preferences similar to those observed in other regions. Taxa found in the upper 0- to 1-cm interval (epifaunal) include Cibicidoides wuellerstorfi and Hoeglundina elegans, while taxa such as Chilostomella and Globobulimina reach maximum abundances in subsurface sediments and have infaunal microhabitat preferences. Cibicidoides bradyi and O. umbonatus live in sediment depths from 0- to 4-cm and have transitional preferences with both epifaunal and infaunal occurrences. Intrageneric differences in test morphologies, including pore distribution, rounded peripheries, and variable spire height, are observed in Cibicidoides and Gyroidinoides and are suggested to be related to microhabitat preferences. Vertical distributions of a number of taxa found in both the 63- to 150-µm and > 150-µm fractions are similar, suggesting that juveniles and adults live under similar microhabitat conditions. Ontogenetic changes in microhabitat preferences of most species are not observed in this study and therefore would not be expected to account for isotopic vital effects reported for some taxa in previous studies.

Gulf of Mexico hypoxia: alternate states and a legacy

Abstract: A 20+ year data set of the size of the hypoxic zone off the Louisiana-Texas coast is analyzed to reveal insights about what causes variation in the size of the hypoxic zone in summer, the accumulation of carbon storage in sediments, and pelagic and sediment oxygen demand. The results of models support the conclusion that some of this variation can be explained by a higher sedimentary oxygen demand, which may be larger than water column respiration rates in summer. Proxies for organic loading to sediments reveal that carbon losses continue after accumulation, and results from other studies indicate that sediment oxygen demand is directly related to surface water phytoplankton production, which has increased because of higher nutrient loading from the Mississippi River watershed. The potential size of the hypoxic zone for a given nitrogen load has increased as a result and has doubled from 1980 to 2000. The development of widespread hypoxia after the early 1980s and its consequences could, therefore, be considered a shift to an alternate ecosystem state. The Action Plan for Reducing, Mitigating, and Controlling Hypoxia in the Northern Gulf of Mexico goal of reducing the size of the hypoxic zone to an average of 5000 km2 by 2015 becomes more difficult to achieve for every year there is no significant reduction in nutrient loading. The decisions made to reduce the size of the hypoxic zone must incorporate these nonlinear responses and, we think, err on the side of caution in assuming that existing management efforts are sufficient to restore water quality on this shelf. The legacy of a higher sediment respiratory demand following eutrophication should apply to other coastal systems.

The δ13C in benthic foraminiferal tests of Fontbotia wuellerstorfi (Schwager) Relative to the δ13C of dissolved inorganic carbon in Southern Ocean Deep Water: Implications for glacial ocean circulation models

Abstract: On a transect between 20° and 70°S in the eastern Atlantic Ocean and Weddell Sea, water samples from 19 hydrographic stations and bottom water from 55 surface sediment samples taken with a multiple corer were investigated for the stable carbon isotopic composition of the total dissolved inorganic carbon (δ13CΣCO2). These measurements were compared to δ13C values determined on live specimens of the benthic foraminifer Fontbotia wuellerstorfi and closely related genera from the same stations. In addition, at 16 stations the stable carbon isotope composition of sedimentary organic carbon was measured. General deepwater and bottom-water mass circulation patterns as inferred from the δ13CΣCO2 are in close agreement with those known from other nonconservative tracers. Very low δ13C values of upper Circumpolar Deep Water (<0.3‰ Pee Dee belemnite (PDB)) in the Polar Front region and the eastern limb of the Weddell gyre coincide with nutrient maxima. However, a significant decoupling of the dissolved phosphate signal from the δ13CΣCO2 signal is indicated in the abyssal Weddell Sea. We attribute this to temperature-dependent fractionation processes during gas exchange of surface waters with the atmosphere at sites of bottom-water formation. Multiple corer water from the sediment/water interface is slightly δ13C depleted relative to deepwater and bottom-water δ13ΣCO2. The surface sediment organic carbon δ13C is 3 to 4‰ lower south of the Polar Front than north of it, and the δ13Corg in freshly accumulated phytodetritus is 3 to 4‰ lower than surface sediment organic carbon δ13C. Comparison of live F. wuellerstorfi δ13C and related genera with bottom-water δ13CΣCO2 exhibits at most stations between the Subtropical Front (≈41°S) and the southern boundary of the Antarctic Circumpolar Current (≈55°S) a significant lowering of foraminiferal δ13C values. Compilation of a mean last glacial/interglacial δ13C amplitude (Δδ13C) from six published southern ocean cores results in a shift of −0.99± 0.13‰ PDB; this shift is greater than that in all other regions. However, all of these cores are from positions close to Recent oceanic fronts. Thus, for these peripheral areas of the southern ocean, we suggest about half of the glacial/interglacial shift can be explained by varying frontal zone positions and widths accompanied by a change in mode and height of export production.