Jan Karolin

Bio: Jan Karolin is an academic researcher from University of Maryland, Baltimore County. The author has contributed to research in topics: Fluorescence & Particle. The author has an hindex of 6, co-authored 9 publications receiving 277 citations.

Phosphorus sequestration in the form of polyphosphate by microbial symbionts in marine sponges

Abstract: Marine sponges are major habitat-forming organisms in coastal benthic communities and have an ancient origin in evolution history. Here, we report significant accumulation of polyphosphate (polyP) granules in three common sponge species of the Caribbean coral reef. The identity of the polyP granules was confirmed by energy-dispersive spectroscopy (EDS) and by the fluorescence properties of the granules. Microscopy images revealed that a large proportion of microbial cells associated with sponge hosts contained intracellular polyP granules. Cyanobacterial symbionts cultured from sponges were shown to accumulate polyP. We also amplified polyphosphate kinase (ppk) genes from sponge DNA and confirmed that the gene was expressed. Based on these findings, we propose here a potentially important phosphorus (P) sequestration pathway through symbiotic microorganisms of marine sponges. Considering the widespread sponge population and abundant microbial cells associated with them, this pathway is likely to have a significant impact on the P cycle in benthic ecosystems.

Fluorescence, Phosphorescence, and Chemiluminescence

Abstract: Noureen Siraj,† Bilal El-Zahab,‡ Suzana Hamdan,† Tony E. Karam,† Louis H. Haber,† Min Li, Sayo O. Fakayode, Susmita Das, Bertha Valle, Robert M. Strongin, Gabor Patonay, Herman O. Sintim, Gary A. Baker, Aleeta Powe, Mark Lowry, Jan O. Karolin, Chris D. Geddes, and Isiah M. Warner*,† †Department of Chemistry, Louisiana State University, Baton Rouge, Louisiana 70803, United States ‡Department of Mechanical and Materials Engineering, Florida International University, Miami, Florida 33174, United States Process Development Center, Albemarle Corporation, Baton Rouge, Louisiana 70805, United States Department of Chemistry, Winston-Salem State University, Winston-Salem, North Carolina 27110, United States Department of Civil Engineering, Adamas Institute of Technology, Barasat, Kolkata 700126, West Bengal India Department of Chemistry, Texas Southern University, Houston, Texas 77004, United States Department of Chemistry, Portland State University, Portland, Oregon 97207, United States Department of Chemistry, Georgia State University, Atlanta, Georgia 30302-4098, United States Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742, United States Department of Chemistry, University of Missouri Columbia, Columbia, Missouri 65211-7600, United States Department of Chemistry, University of Louisville, Louisville, Kentucky 40208, United States Institute of Fluorescence, University of Maryland Baltimore County, Baltimore, Maryland 21202, United States

Experimental and theoretical study of the distance dependence of metal-enhanced fluorescence, phosphorescence and delayed fluorescence in a single system

Abstract: Distance dependent singlet and triplet metal-enhanced emission of eosin from silica coated silver island films (SiFs) has been studied by steady-state and time resolved fluorescence techniques, along with theoretical finite difference time domain (FDTD) numerical simulations, to understand how the thickness of the dielectric coating surrounding silver nanoparticles fundamentally affects luminescence enhancement. Our findings suggest that the distance dependence of metal-enhanced phenomena such as fluorescence, phosphorescence and delayed fluorescence is underpinned by the decay of the electric near-field, and depending on the actual silver silica sample embodiment, one can see either decreased or enhanced luminescence. These results not only expand our current MEF thinking but also suggest that one may well be able to approximate plasmon-enhanced luminescence values.

Metal-enhanced fluorescence based excitation volumetric effect of plasmon-enhanced singlet oxygen and super oxide generation

Abstract: In this contribution we show that the Metal-Enhanced Fluorescence (MEF) Excitation Volumetric Effect (EVE), has a profound effect on the formation of Reactive Oxygen Species (ROS), such as singlet oxygen (1O2) and superoxide anion radical (O2−*), when sensitizers are placed in close proximity to plasmon supporting nanoparticulate substrates In particular, when the singlet oxygen sensitizer rose bengal is placed on a SiFs surface, ie on a silver island film, the 1O2 response to power is non-linear, and at 100 mW excitation power (535 nm) it is about 5 times higher, as compared to glass control samples, measured with the commercially available 1O2 probe Sensor Green™ We also report a similar power dependence of superoxide generation for acridine on SiFs surfaces, but using the dihydroethidium O2−* probe (DHE) Our findings are consistent with our previously postulated Metal-Enhanced Fluorescence (MEF) and EVE models

Photophysical Characterization and α-Type Delayed Luminescence of Rapidly Prepared Au Clusters

Abstract: A new and perspective addition to traditional fluorescent probes is the Au clusters (8–25 atoms) which can label proteins, rendering them extremely bright and photostable. In this paper, we show that albumins can quickly and effectively be labeled using microwave acceleration, which shortens the time of Au labeling from several hours to <30 s. Chromatography of Au proteins and FLIM (fluorescence lifetime imaging microscopy) reveals that Au clusters readily form and remain associated with the proteins. Subsequently, luminescence of the Au proteins (BSA, biotinylated-BSA, HSA) was studied using 3D-emission spectroscopy, time-resolved spectroscopy, and FLIM. We show that the red luminescence of the 25-atom gold cluster attached to the proteins has a broad range of emission lifetimes: about 95% of the total emission has a lifetime component ranging from 0.4 to 105 ns, and ∼5% is a delayed (alpha) emission with a range of lifetimes from 1 to 280 μs. The spectrum of Au delayed emission coincides with its fluore...

疟原虫var基因转换速率变化导致抗原变异[英]／Paul H, Robert P, Christodoulou Z, et al//Proc Natl Acad Sci U S A

Abstract: 抗原变异可使得多种致病微生物易于逃避宿主免疫应答。表达在感染红细胞表面的恶性疟原虫红细胞表面蛋白1（PfPMP1）与感染红细胞、内皮细胞、树突状细胞以及胎盘的单个或多个受体作用，在黏附及免疫逃避中起关键的作用。每个单倍体基因组var基因家族编码约60种成员，通过启动转录不同的var基因变异体为抗原变异提供了分子基础。

Deep Eutectic Solvents: A Review of Fundamentals and Applications.

Abstract: Deep eutectic solvents (DESs) are an emerging class of mixtures characterized by significant depressions in melting points compared to those of the neat constituent components. These materials are promising for applications as inexpensive "designer" solvents exhibiting a host of tunable physicochemical properties. A detailed review of the current literature reveals the lack of predictive understanding of the microscopic mechanisms that govern the structure-property relationships in this class of solvents. Complex hydrogen bonding is postulated as the root cause of their melting point depressions and physicochemical properties; to understand these hydrogen bonded networks, it is imperative to study these systems as dynamic entities using both simulations and experiments. This review emphasizes recent research efforts in order to elucidate the next steps needed to develop a fundamental framework needed for a deeper understanding of DESs. It covers recent developments in DES research, frames outstanding scientific questions, and identifies promising research thrusts aligned with the advancement of the field toward predictive models and fundamental understanding of these solvents.

Insights into the Coral Microbiome: Underpinning the Health and Resilience of Reef Ecosystems

Abstract: Corals are fundamental ecosystem engineers, creating large, intricate reefs that support diverse and abundant marine life. At the core of a healthy coral animal is a dynamic relationship with microorganisms, including a mutually beneficial symbiosis with photosynthetic dinoflagellates (Symbiodinium spp.) and enduring partnerships with an array of bacterial, archaeal, fungal, protistan, and viral associates, collectively termed the coral holobiont. The combined genomes of this coral holobiont form a coral hologenome, and genomic interactions within the hologenome ultimately define the coral phenotype. Here we integrate contemporary scientific knowledge regarding the ecological, host-specific, and environmental forces shaping the diversity, specificity, and distribution of microbial symbionts within the coral holobiont, explore physiological pathways that contribute to holobiont fitness, and describe potential mechanisms for holobiont homeostasis. Understanding the role of the microbiome in coral resilience, acclimation, and environmental adaptation is a new frontier in reef science that will require large-scale collaborative research efforts.

A review on graphene-based nanocomposites for electrochemical and fluorescent biosensors

Abstract: Biosensors with high sensitivity, selectivity and a low limit of detection, reaching nano/picomolar concentrations of biomolecules, are important to the medical sciences and healthcare industry for evaluating physiological and metabolic parameters. Over the last decade, different nanomaterials have been exploited to design highly efficient biosensors for the detection of analyte biomolecules. The discovery of graphene has spectacularly accelerated research on fabricating low-cost electrode materials because of its unique physical properties, including high specific surface area, high carrier mobility, high electrical conductivity, flexibility, and optical transparency. Graphene and its oxygenated derivatives, including graphene oxide (GO) and reduced graphene oxide (rGO), are becoming an important class of nanomaterials in the field of biosensors. The presence of oxygenated functional groups makes GO nanosheets strongly hydrophilic, facilitating chemical functionalization. Graphene, GO and rGO nanosheets can be easily combined with various types of inorganic nanoparticles, including metals, metal oxides, semiconducting nanoparticles, quantum dots, organic polymers and biomolecules, to create a diverse range of graphene-based nanocomposites with enhanced sensitivity for biosensor applications. This review summarizes the advances in two-dimensional (2D) and three-dimensional (3D) graphene-based nanocomposites as emerging electrochemical and fluorescent biosensing platforms for the detection of a wide range of biomolecules with enhanced sensitivity, selectivity and a low limit of detection. The biofunctionalization and nanocomposite formation processes of graphene-based materials and their unique properties, surface functionalization, enzyme immobilization strategies, covalent immobilization, physical adsorption, biointeractions and direct electron transfer (DET) processes are discussed in connection with the design and fabrication of biosensors. The enzymatic and nonenzymatic reactions on graphene-based nanocomposite surfaces for glucose- and cholesterol-related electrochemical biosensors are analyzed. This review covers a very broad range of graphene-based electrochemical and fluorescent biosensors for the detection of glucose, cholesterol, hydrogen peroxide (H2O2), nucleic acids (DNA/RNA), genes, enzymes, cofactors nicotinamide adenine dinucleotide (NADH) and adenosine triphosphate (ATP), dopamine (DA), ascorbic acid (AA), uric acid (UA), cancer biomarkers, pathogenic microorganisms, food toxins, toxic heavy metal ions, mycotoxins, and pesticides. The sensitivity and selectivity of graphene-based electrochemical and fluorescent biosensors are also examined with respect to interfering analytes present in biological systems. Finally, the future outlook for the development of graphene based biosensing technology is outlined.

Plasmon-enhanced fluorescence spectroscopy

Abstract: Fluorescence spectroscopy with strong emitters is a remarkable tool with ultra-high sensitivity for detection and imaging down to the single-molecule level. Plasmon-enhanced fluorescence (PEF) not only offers enhanced emissions and decreased lifetimes, but also allows an expansion of the field of fluorescence by incorporating weak quantum emitters, avoiding photobleaching and providing the opportunity of imaging with resolutions significantly better than the diffraction limit. It also opens the window to a new class of photostable probes by combining metal nanostructures and quantum emitters. In particular, the shell-isolated nanostructure-enhanced fluorescence, an innovative new mode for plasmon-enhanced surface analysis, is included. These new developments are based on the coupling of the fluorophores in their excited states with localized surface plasmons in nanoparticles, where local field enhancement leads to improved brightness of molecular emission and higher detection sensitivity. Here, we review the recent progress in PEF with an emphasis on the mechanism of plasmon enhancement, substrate preparation, and some advanced applications, including an outlook on PEF with high time- and spatially resolved properties.