Jay L. Garland

Bio: Jay L. Garland is an academic researcher from United States Environmental Protection Agency. The author has contributed to research in topics: Greywater & Wastewater. The author has an hindex of 40, co-authored 155 publications receiving 9573 citations. Previous affiliations of Jay L. Garland include Kennedy Space Center & University of Florida.

Classification and characterization of heterotrophic microbial communities on the basis of patterns of community-level sole-carbon-source utilization.

Abstract: The BLOLOG redox technology based on tetrazolium dye reduction as an indicator of sole-carbon-source utilization was evaluated as a rapid, community-level method to characterize and classify heterotrophic microbial communities. Direct incubation of whole environmental samples (aquatic, soil, and rhizosphere) in BIOLOG plates containing 95 separate carbon sources produced community-dependent patterns of sole-carbon-source utilization. Principal-component analysis of color responses quantified from digitized images of plates revealed distinctive patterns among microbial habitats and spatial gradients within soil and estuarine sites. Correlation of the original carbon source variables to the principal components gives a functional basis to distinctions among communities. Intensive spatial and temporal analysis of microbial communities with this technique can produce ecologically relevant classifications of heterotrophic microbial communities.

Manual of environmental microbiology.

Abstract: Section I: Introduction to Environmental Microbiology Section II: General Methodology Section III: Water Microbiology in Public Health Section IV: Aquatic Environments Section V: Soil, Rhizosphere and Phyllosphere Section VI: Subsurface and Landfills Section VII: Aerobiology Section VIII: Biotransformation and Biodegradation

Analytical approaches to the characterization of samples of microbial communities using patterns of potential C source utilization.

Abstract: Profiles of potential utilization of 95 separate C sources by microbial communities can be readily generated from direct incubation of environmental samples in BIOLOG microplates. Color formation from a redox indicator dye is used to quantify the degree of C source utilization. I aimed to examine different analytical approaches for classifying microbial communities based on these profiles. Specifically, the relative effects of average rate of color development versus the pattern of relative C source utilization on the classification of rhizosphere samples from different crop types were evaluated. The average rate of color development was correlated to the density of total (acridine-orange) bacterial cells (R2 = 0.52) and active (5-cyano-2,3-ditolyl tetrazolium chloride) bacterial cells (R2 = 0.70) inoculated into the plate. Analysis of plates with different rates of color development after a specific incubation period resulted in samples with variation in the overall extent of color development (expressed as average well color development, or AWCD). Classification of these samples using principal component analysis was significantly influenced by the variation in AWCD, resulting in the classification of samples based on the density of inoculum rather than the pattern of C source utilization. The effect of variation in AWCD was eliminated by normalizing data prior to ordination, or by using an alternative ordination technique, detrended correspondence analysis. Variation in AWCD can be limited through multiple-plate readings and subsequent selection of plates with a common reference point in AWCD. The specific AWCD used for analysis does not appear important for classification purposes; consistent discrimination of rhizosphere samples from different crop types was apparent for analysis across a wide range of AWCD (0.25–1.00 abs. units). The specific differences in C source utilization between rhizosphere sample types did depend on the set point used for analysis due to the differences in the rate of color formation among wells. Results suggest that single-plate readings can be used to classify samples, but only if potential differences in AWCD are accounted for in the data analysis. Repeated plate readings will provide a more complete understanding of differences in C source utilization among samples.

The Theory of Island Biogeography

Abstract: Preface to the Princeton Landmarks in Biology Edition vii Preface xi Symbols Used xiii 1. The Importance of Islands 3 2. Area and Number of Speicies 8 3. Further Explanations of the Area-Diversity Pattern 19 4. The Strategy of Colonization 68 5. Invasibility and the Variable Niche 94 6. Stepping Stones and Biotic Exchange 123 7. Evolutionary Changes Following Colonization 145 8. Prospect 181 Glossary 185 References 193 Index 201

Biological control of soil-borne pathogens by fluorescent pseudomonads

Abstract: Particular bacterial strains in certain natural environments prevent infectious diseases of plant roots. How these bacteria achieve this protection from pathogenic fungi has been analysed in detail in biocontrol strains of fluorescent pseudomonads. During root colonization, these bacteria produce antifungal antibiotics, elicit induced systemic resistance in the host plant or interfere specifically with fungal pathogenicity factors. Before engaging in these activities, biocontrol bacteria go through several regulatory processes at the transcriptional and post-transcriptional levels.

Resistance, resilience, and redundancy in microbial communities

Abstract: Although it is generally accepted that plant community composition is key for predicting rates of ecosystem processes in the face of global change, microbial community composition is often ignored in ecosystem modeling. To address this issue, we review recent experiments and assess whether microbial community composition is resistant, resilient, or functionally redundant in response to four different disturbances. We find that the composition of most microbial groups is sensitive and not immediately resilient to disturbance, regardless of taxonomic breadth of the group or the type of disturbance. Other studies demonstrate that changes in composition are often associated with changes in ecosystem process rates. Thus, changes in microbial communities due to disturbance may directly affect ecosystem processes. Based on these relationships, we propose a simple framework to incorporate microbial community composition into ecosystem process models. We conclude that this effort would benefit from more empirical data on the links among microbial phylogeny, physiological traits, and disturbance responses. These relationships will determine how readily microbial community composition can be used to predict the responses of ecosystem processes to global change.

Marine viruses and their biogeochemical and ecological effects

Abstract: Viruses are the most common biological agents in the sea, typically numbering ten billion per litre. They probably infect all organisms, can undergo rapid decay and replenishment, and influence many biogeochemical and ecological processes, including nutrient cycling, system respiration, particle size-distributions and sinking rates, bacterial and algal biodiversity and species distributions, algal bloom control, dimethyl sulphide formation and genetic transfer. Newly developed fluorescence and molecular techniques leave the field poised to make significant advances towards evaluating and quantifying such effects.

Virioplankton: viruses in aquatic ecosystems

Abstract: The discovery that viruses may be the most abundant organisms in natural waters, surpassing the number of bacteria by an order of magnitude, has inspired a resurgence of interest in viruses in the aquatic environment. Surprisingly little was known of the interaction of viruses and their hosts in nature. In the decade since the reports of extraordinarily large virus populations were published, enumeration of viruses in aquatic environments has demonstrated that the virioplankton are dynamic components of the plankton, changing dramatically in number with geographical location and season. The evidence to date suggests that virioplankton communities are composed principally of bacteriophages and, to a lesser extent, eukaryotic algal viruses. The influence of viral infection and lysis on bacterial and phytoplankton host communities was measurable after new methods were developed and prior knowledge of bacteriophage biology was incorporated into concepts of parasite and host community interactions. The new methods have yielded data showing that viral infection can have a significant impact on bacteria and unicellular algae populations and supporting the hypothesis that viruses play a significant role in microbial food webs. Besides predation limiting bacteria and phytoplankton populations, the specific nature of virus-host interaction raises the intriguing possibility that viral infection influences the structure and diversity of aquatic microbial communities. Novel applications of molecular genetic techniques have provided good evidence that viral infection can significantly influence the composition and diversity of aquatic microbial communities.