J
Jean-Christophe Olivo-Marin
Researcher at Pasteur Institute
Publications - 275
Citations - 15359
Jean-Christophe Olivo-Marin is an academic researcher from Pasteur Institute. The author has contributed to research in topics: Image segmentation & Compressed sensing. The author has an hindex of 56, co-authored 259 publications receiving 13384 citations. Previous affiliations of Jean-Christophe Olivo-Marin include Max Planck Society & Centre national de la recherche scientifique.
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Journal ArticleDOI
Icy: an open bioimage informatics platform for extended reproducible research
Fabrice de Chaumont,Stephane Dallongeville,Nicolas Chenouard,Nicolas Hervé,Sorin Pop,Thomas Provoost,Vannary Meas-Yedid,Praveen Pankajakshan,Timothee Lecomte,Yoann Le Montagner,Thibault Lagache,Alexandre Dufour,Jean-Christophe Olivo-Marin +12 more
TL;DR: Icy is a collaborative bioimage informatics platform that combines a community website for contributing and sharing tools and material, and software with a high-end visual programming framework for seamless development of sophisticated imaging workflows.
Journal ArticleDOI
Objective comparison of particle tracking methods
Nicolas Chenouard,Ihor Smal,Fabrice de Chaumont,Martin Maška,Martin Maška,Ivo F. Sbalzarini,Yuanhao Gong,Janick Cardinale,Craig Carthel,Stefano Coraluppi,Mark R. Winter,Andrew R. Cohen,William J. Godinez,Karl Rohr,Yannis Kalaidzidis,Liang Liang,James S. Duncan,Hongying Shen,Yingke Xu,Klas E. G. Magnusson,Joakim Jalden,Helen M. Blau,Perrine Paul-Gilloteaux,Philippe Roudot,Charles Kervrann,François Waharte,Jean-Yves Tinevez,Spencer L. Shorte,Joost Willemse,Katherine Celler,Gilles P. van Wezel,Han-Wei Dan,Yuh-Show Tsai,Carlos Ortiz de Solórzano,Jean-Christophe Olivo-Marin,Erik Meijering +35 more
TL;DR: Although no single method performed best across all scenarios, the results revealed clear differences between the various approaches, leading to notable practical conclusions for users and developers.
Journal ArticleDOI
Extraction of spots in biological images using multiscale products
TL;DR: A new method to detect and count bright spots in fluorescence images coming from biological immunomicroscopy experiments is presented, based on the multiscale product of subband images resulting from the a trous wavelet transform decomposition of the original image, after thresholding of non-significant coefficients.
Journal ArticleDOI
Prions hijack tunnelling nanotubes for intercellular spread
Karine Gousset,Edwin Schiff,Edwin Schiff,Christelle Langevin,Zrinka Marijanovic,Anna Caputo,Anna Caputo,Duncan T. Browman,Nicolas Chenouard,Fabrice de Chaumont,Angelo Martino,Jost Enninga,Jean-Christophe Olivo-Marin,Daniela N. Männel,Chiara Zurzolo,Chiara Zurzolo +15 more
TL;DR: It is proposed that TNTs are involved in the spreading of PrPSc within neurons in the CNS and from the peripheral site of entry to the PNS by neuroimmune interactions with dendritic cells.
Journal ArticleDOI
Gaussian approximations of fluorescence microscope point-spread function models.
TL;DR: The least-squares Gaussian approximations of the diffraction-limited 2D-3D paraxial-nonparaxial point-spread functions (PSFs) of the wide field fluorescence microscope (WFFM), the laser scanning confocal microscope (LSCM), and the disk scanning conf focal microscope (DSCM) are studied.