J
Jeroen Raes
Researcher at Katholieke Universiteit Leuven
Publications - 293
Citations - 85097
Jeroen Raes is an academic researcher from Katholieke Universiteit Leuven. The author has contributed to research in topics: Microbiome & Medicine. The author has an hindex of 84, co-authored 240 publications receiving 66805 citations. Previous affiliations of Jeroen Raes include Flanders Institute for Biotechnology & Université catholique de Louvain.
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Journal ArticleDOI
Marine DNA Viral Macro- and Microdiversity from Pole to Pole.
Ann C. Gregory,Ahmed A. Zayed,Nádia Conceição-Neto,Ben Temperton,Ben Bolduc,Adriana Alberti,Mathieu Ardyna,Ksenia Arkhipova,Margaux Carmichael,Corinne Cruaud,Céline Dimier,Céline Dimier,Guillermo Dominguez-Huerta,Joannie Ferland,Stefanie Kandels,Yunxiao Liu,Claudie Marec,Stephane Pesant,Marc Picheral,Sergey Pisarev,Julie Poulain,Jean-Éric Tremblay,Dean R. Vik,Silvia G. Acinas,Marcel Babin,Peer Bork,Emmanuel Boss,Chris Bowler,Guy Cochrane,Colomban de Vargas,Michael J. Follows,Gabriel Gorsky,Nigel Grimsley,Lionel Guidi,Pascal Hingamp,Daniele Iudicone,Olivier Jaillon,Stefanie Kandels-Lewis,Lee Karp-Boss,Eric Karsenti,Fabrice Not,Hiroyuki Ogata,Nicole J. Poulton,Jeroen Raes,Christian Sardet,Sabrina Speich,Lars Stemmann,Matthew B. Sullivan,Shinichi Sunagawa,Patrick Wincker,Alexander I. Culley,Bas E. Dutilh,Bas E. Dutilh,Simon Roux +53 more
TL;DR: An ∼12-fold expanded global ocean DNA virome dataset is established of 195,728 viral populations, now including the Arctic Ocean, and it is validated that these populations form discrete genotypic clusters.
Journal ArticleDOI
Inflammation-associated enterotypes, host genotype, cage and inter-individual effects drive gut microbiota variation in common laboratory mice
Falk Hildebrand,Thi Loan Anh Nguyen,Brigitta M. Brinkman,Roberto Garcia Yunta,Bénédicte Cauwe,Peter Vandenabeele,Adrian Liston,Jeroen Raes +7 more
TL;DR: The detection of enterotypes suggests a common ecological cause, possibly low-grade inflammation that might drive differences among gut microbiota composition in mammals, and has important consequences for experimental design in mouse microbiome research.
Journal ArticleDOI
Integrated Metagenomics/Metaproteomics Reveals Human Host-Microbiota Signatures of Crohn's Disease
Alison R. Erickson,Brandi L. Cantarel,Regina Lamendella,Youssef Darzi,Emmanuel F. Mongodin,Chongle Pan,Manesh Shah,Jonas Halfvarson,Curt Tysk,Bernard Henrissat,Jeroen Raes,Nathan C Verberkmoes,Claire M. Fraser,Robert L. Hettich,Janet K. Jansson +14 more
TL;DR: The eco-systems biology approach underscores the link between the gut microbiota and functional alterations in the pathophysiology of Crohn's disease and aids in identification of novel diagnostic targets and disease specific biomarkers.
Journal ArticleDOI
A Holistic Approach to Marine Eco-Systems Biology
Eric Karsenti,Silvia G. Acinas,Peer Bork,Chris Bowler,Chris Bowler,Colomban de Vargas,Colomban de Vargas,Jeroen Raes,Matthew B. Sullivan,Detlev Arendt,Francesca Benzoni,Jean-Michel Claverie,Jean-Michel Claverie,Mick Follows,G. Gorsky,G. Gorsky,Pascal Hingamp,Pascal Hingamp,Daniele Iudicone,Olivier Jaillon,Stefanie Kandels-Lewis,Uros Krzic,Fabrice Not,Fabrice Not,Hiroyuki Ogata,Hiroyuki Ogata,Stephane Pesant,Emmanuel G. Reynaud,Christian Sardet,Christian Sardet,Michael E. Sieracki,Sabrina Speich,Didier Velayoudon,Jean Weissenbach,Patrick Wincker +34 more
TL;DR: The structure, robustness, and dynamics of ocean plankton ecosystems remain poorly understood due to sampling, analysis, and computational limitations, and the Tara Oceans consortium organizes expeditions to help fill this gap.
Plankton networks driving carbon export in the oligotrophic ocean
Lionel Guidi,Samuel Chaffron,Lucie Bittner,Damien Eveillard,Abdelhalim Larhlimi,Simon Roux,Youssef Darzi,Stéphane Audic,Léo Berline,Jennifer R. Brum,Luis Pedro Coelho,Julio Cesar Ignacio Espinoza,Shruti Malviya,Shinichi Sunagawa,Céline Dimier,Stefanie Kandels-Lewis,Marc Picheral,Julie Poulain,Sarah Searson,Lars Stemmann,Fabrice Not,Pascal Hingamp,Sabrina Speich,Mick Follows,Lee Karp-Boss,Emmanuel Boss,Hiroyuki Ogata,Stephane Pesant,Jean Weissenbach,Patrick Wincker,Silvia G. Acinas,Peer Bork,Colomban de Vargas,Daniele Iudicone,Matthew B. Sullivan,Jeroen Raes,Eric Karsenti,Chris Bowler,Gabriel Gorsky +38 more