“Unpaired Image-to-Image Translation using Cycle-Consistent Adversarial Networks”の学習報告

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Regularization Of Inverse Problems

Computational and Mathematical Methods in Medicine

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Magnetic Resonance Imaging Physical Principles And Sequence Design

In MRI, the main magnetic field polarizes the electron cloud of a molecule, generating a chemical shift for observer protons within the molecule and a magnetic susceptibility inhomogeneity field for observer protons outside the molecule. The number of water protons surrounding a molecule for detecting its magnetic susceptibility is vastly greater than the number of protons within the molecule for detecting its chemical shift. However, the study of tissue magnetic susceptibility has been hindered by poor molecular specificities of hitherto used methods based on MRI signal phase and T2* contrast, which depend convolutedly on surrounding susceptibility sources. Deconvolution of the MRI signal phase can determine tissue susceptibility but is challenged by the lack of MRI signal in the background and by the zeroes in the dipole kernel. Recently, physically meaningful regularizations, including the Bayesian approach, have been developed to enable accurate quantitative susceptibility mapping (QSM) for studying iron distribution, metabolic oxygen consumption, blood degradation, calcification, demyelination, and other pathophysiological susceptibility changes, as well as contrast agent biodistribution in MRI. This paper attempts to summarize the basic physical concepts and essential algorithmic steps in QSM, to describe clinical and technical issues under active development, and to provide references, codes, and testing data for readers interested in QSM. Magn Reson Med 73:82–101, 2015. © 2014 The Authors. Magnetic Resonance in Medicine Published by Wiley Periodicals, Inc. on behalf of International Society of Medicine in Resonance. This is an open access article under the terms of the Creative commons Attribution License, which permits use, distribution, and reproduction in any medium, provided the original work is properly cited.

Quantitative susceptibility mapping (QSM): Decoding MRI data for a tissue magnetic biomarker.

We developed a new image reconstruction algorithm for magnetic resonance electrical impedance tomography (MREIT). MREIT is a new EIT imaging technique integrated into magnetic resonance imaging (MRI) system. Based on the assumption that internal current density distribution is obtained using magnetic resonance imaging (MRI) technique, the new image reconstruction algorithm called J-substitution algorithm produces cross-sectional static images of resistivity (or conductivity) distributions. Computer simulations show that the spatial resolution of resistivity image is comparable to that of MRI. MREIT provides accurate high-resolution cross-sectional resistivity images making resistivity values of various human tissues available for many biomedical applications.

Magnetic resonance electrical impedance tomography (MREIT): simulation study of J-substitution algorithm

This paper presents a deep learning method for faster magnetic resonance imaging (MRI) by reducing k-space data with sub-Nyquist sampling strategies and provides a rationale for why the proposed approach works well. Uniform subsampling is used in the time-consuming phase-encoding direction to capture high-resolution image information, while permitting the image-folding problem dictated by the Poisson summation formula. To deal with the localization uncertainty due to image folding, a small number of low-frequency k-space data are added. Training the deep learning net involves input and output images that are pairs of the Fourier transforms of the subsampled and fully sampled k-space data. Our experiments show the remarkable performance of the proposed method; only 29[Formula: see text] of the k-space data can generate images of high quality as effectively as standard MRI reconstruction with the fully sampled data.

/pdf/deep-learning-for-undersampled-mri-reconstruction-1yqf2sy375.pdf

Deep learning for undersampled MRI reconstruction.

This paper presents a deep learning method for faster magnetic resonance imaging (MRI) by reducing k-space data with sub-Nyquist sampling strategies and provides a rationale for why the proposed approach works well. Uniform subsampling is used in the time-consuming phase-encoding direction to capture high-resolution image information, while permitting the image-folding problem dictated by the Poisson summation formula. To deal with the localization uncertainty due to image folding, very few low-frequency k-space data are added. Training the deep learning net involves input and output images that are pairs of Fourier transforms of the subsampled and fully sampled k-space data. Numerous experiments show the remarkable performance of the proposed method; only 29% of k-space data can generate images of high quality as effectively as standard MRI reconstruction with fully sampled data.

Deep learning for undersampled MRI reconstruction

Cross-sectional imaging of an electrical conductivity distribution inside the human body has been an active research goal in impedance imaging. By injecting current into an electrically conducting object through surface electrodes, we induce current density and voltage distributions. Based on the fact that these are determined by the conductivity distribution as well as the geometry of the object and the adopted electrode configuration, electrical impedance tomography (EIT) reconstructs cross-sectional conductivity images using measured current-voltage data on the surface. Unfortunately, there exist inherent technical difficulties in EIT. First, the relationship between the boundary current-voltage data and the internal conductivity distribution bears a nonlinearity and low sensitivity, and hence the inverse problem of recovering the conductivity distribution is ill posed. Second, it is difficult to obtain accurate information on the boundary geometry and electrode positions in practice, and the inverse problem is sensitive to these modeling errors as well as measurement artifacts and noise. These result in EIT images with a poor spatial resolution. In order to produce high-resolution conductivity images, magnetic resonance electrical impedance tomography (MREIT) has been lately developed. Noting that injection current produces a magnetic as well as electric field inside the imaging object, we can measure the induced internal magnetic flux density data using an MRI scanner. Utilization of the internal magnetic flux density is the key idea of MREIT to overcome the technical difficulties in EIT. Following original ideas on MREIT in early 1990s, there has been a rapid progress in its theory, algorithm and experimental techniques. The technique has now advanced to the stage of human experiments. Though it is still a few steps away from routine clinical use, its potential is high as a new impedance imaging modality providing conductivity images with a spatial resolution of a few millimeters or less. This paper reviews MREIT from the basics to the most recent research outcomes. Focusing on measurement techniques and experimental methods rather than mathematical issues, we summarize what has been done and what needs to be done. Suggestions for future research directions, possible applications in biomedicine, biology, chemistry and material science are discussed.

https://iopscience.iop.org/article/10.1088/0967-3334/29/10/R01/pdf

Magnetic resonance electrical impedance tomography (MREIT) for high-resolution conductivity imaging

Magnetic resonance current density imaging (MRCDI) is to provide current density images of a subject using a magnetic resonance imaging (MRI) scanner with a current injection apparatus. The injection current generates a magnetic field that we can measure from MR phase images. We obtain internal current density images from the measured magnetic flux densities via Ampere's law. However, we must rotate the subject to acquire all of the three components of the induced magnetic flux density. This subject rotation is impractical in clinical MRI scanners when the subject is a human body. In this paper, we propose a way to eliminate the requirement of subject rotation by careful mathematical analysis of the MRCDI problem. In our new MRCDI technique, we need to measure only one component of the induced magnetic flux density and reconstruct both cross-sectional conductivity and current density images without any subject rotation.

Jin Keun Seo

Papers

Magnetic resonance electrical impedance tomography (MREIT): simulation study of J-substitution algorithm

Deep learning for undersampled MRI reconstruction.

Deep learning for undersampled MRI reconstruction

Magnetic resonance electrical impedance tomography (MREIT) for high-resolution conductivity imaging

Reconstruction of conductivity and current density images using only one component of magnetic field measurements