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John P. Hamilton

Researcher at Michigan State University

Publications -  81
Citations -  7375

John P. Hamilton is an academic researcher from Michigan State University. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 35, co-authored 68 publications receiving 5774 citations. Previous affiliations of John P. Hamilton include Research Medical Center & Colorado State University.

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Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis

TL;DR: Alternative splicing is widespread in both rice and Arabidopsis and these species share many common features, indicating that many isoforms will presumably have negative consequences for protein structure and function, suggesting that their biological role involves post-transcriptional regulation of gene expression.
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Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire

TL;DR: Access to the P. ultimum genome has revealed not only core pathogenic mechanisms within the oomycetes but also lineage-specific genes associated with the alternative virulence and lifestyles found within the pythiaceous lineages compared to the Peronosporaceae.
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Development of a large SNP genotyping array and generation of high-density genetic maps in tomato.

TL;DR: An array for tomato with 8,784 Single Nucleotide Polymorphisms (SNPs) mainly discovered based on NGS-derived transcriptome sequences revealed that genomic regions with high recombination rates were consistent with the known distribution of euchromatin across the 12 chromosomes, while very low recombination Rates observed in the heterochromatic regions.
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Genome diversity of tuber-bearing Solanum uncovers complex evolutionary history and targets of domestication in the cultivated potato

TL;DR: A historic role of wild Solanum species in the diversification of long-day–adapted tetraploid potatoes is uncovered, showing that extant natural populations represent an essential source of untapped adaptive potential.