Jorge S. David

Bio: Jorge S. David is an academic researcher from Instituto Superior de Agronomia. The author has contributed to research in topics: Transpiration & Evergreen. The author has an hindex of 25, co-authored 46 publications receiving 3288 citations. Previous affiliations of Jorge S. David include University of Lisbon & Technical University of Lisbon.

Drying and wetting of Mediterranean soils stimulates decomposition and carbon dioxide emission: the "Birch effect".

Abstract: Observations on the net carbon exchange of forests in the European Mediterranean region, measured recently by the eddy covariance method, have revived interest in a phenomenon first characterized on agricultural and forest soils in East Africa in the 1950s and 1960s by H. F. Birch and now often referred to as the "Birch effect." When soils become dry during summer because of lack of rain, as is common in regions with Mediterranean climate, or are dried in the laboratory in controlled conditions, and are then rewetted by precipitation or irrigation, there is a burst of decomposition, mineralization and release of inorganic nitrogen and CO(2). In forests in Mediterranean climates in southern Europe, this effect has been observed with eddy covariance techniques and soil respiration chambers at the stand and small plot scales, respectively. Following the early work of Birch, laboratory incubations of soils at controlled temperatures and water contents have been used to characterize CO(2) release following the rewetting of dry soils. A simple empirical model based on laboratory incubations demonstrates that the amount of carbon mineralized over one year can be predicted from soil temperature and precipitation regime, provided that carbon lost as CO(2) is taken into account. We show that the amount of carbon returned to the atmosphere following soil rewetting can reduce significantly the annual net carbon gain by Mediterranean forests.

Water-use strategies in two co-occurring Mediterranean evergreen oaks: surviving the summer drought.

Abstract: In the Mediterranean evergreen oak woodlands of southern Portugal, the main tree species are Quercus ilex ssp. rotundifolia Lam. (holm oak) and Quercus suber L. (cork oak). We studied a savannah-type woodland where these species coexist, with the aim of better understanding the mechanisms of tree adaptation to seasonal drought. In both species, seasonal variations in transpiration and predawn leaf water potential showed a maximum in spring followed by a decline through the rainless summer and a recovery with autumn rainfall. Although the observed decrease in predawn leaf water potential in summer indicates soil water depletion, trees maintained transpiration rates above 0.7 mm day(-1) during the summer drought. By that time, more than 70% of the transpired water was being taken from groundwater sources. The daily fluctuations in soil water content suggest that some root uptake of groundwater was mediated through the upper soil layers by hydraulic lift. During the dry season, Q. ilex maintained higher predawn leaf water potentials, canopy conductances and transpiration rates than Q. suber. The higher water status of Q. ilex was likely associated with their deeper root systems compared with Q. suber. Whole-tree hydraulic conductance and minimum midday leaf water potential were lower in Q. ilex, indicating that Q. ilex was more tolerant to drought than Q. suber. Overall, Q. ilex seemed to have more effective drought avoidance and drought tolerance mechanisms than Q. suber.

Net ecosystem carbon exchange in three contrasting Mediterranean ecosystems ? the effect of drought

Abstract: . Droughts reduce gross primary production (GPP) and ecosystem respiration (Reco), contributing to most of the inter-annual variability in terrestrial carbon sequestration. In seasonally dry climates (Mediterranean), droughts result from reductions in annual rainfall and changes in rain seasonality. We compared carbon fluxes measured by the eddy covariance technique in three contrasting ecosystems in southern Portugal: an evergreen oak woodland (savannah-like) with ca.~21% tree crown cover, a grassland dominated by herbaceous annuals and a coppiced short-rotation eucalyptus plantation. During the experimental period (2003–2006) the eucalyptus plantation was always the strongest sink for carbon: net ecosystem exchange rate (NEE) between −861 and −399 g C m−2 year−1. The oak woodland and the grassland were much weaker sinks for carbon: NEE varied in the oak woodland between −140 and −28 g C m−2 year−1 and in the grassland between −190 and +49 g C m−2 year−1. The eucalyptus stand had higher GPP and a lower proportion of GPP spent in respiration than the other systems. The higher GPP resulted from high leaf area duration (LAD), as a surrogate for the photosynthetic photon flux density absorbed by the canopy. The eucalyptus had also higher rain use efficiency (GPP per unit of rain volume) and light use efficiency (the daily GPP per unit incident photosynthetic photon flux density) than the other two ecosystems. The effects of a severe drought could be evaluated during the hydrological-year (i.e., from October to September) of 2004–2005. Between October 2004 and June 2005 the precipitation was only 40% of the long-term average. In 2004–2005 all ecosystems had GPP lower than in wetter years and carbon sequestration was strongly restricted (less negative NEE). The grassland was a net source of carbon dioxide (+49 g C m−2 year−1). In the oak woodland a large proportion of GPP resulted from carbon assimilated by its annual vegetation component, which was strongly affected by the shortage of rain in winter. Overall, severe drought affected more GPP than Reco leading to the deterioration of NEE. Although the rain-use efficiency of the eucalyptus plantation increased in the dry year, this was not the case of evergreen oak woodland, which rain-use efficiency was not influenced by drought. Recovery after drought alleviation, i.e., beginning with heavy rain in October 2005, was fully accomplished in 2006 in the oak woodland and grassland, but slow in the eucalyptus plantation.

New handbook for standardised measurement of plant functional traits worldwide

Abstract: Plant functional traits are the features (morphological, physiological, phenological) that represent ecological strategies and determine how plants respond to environmental factors, affect other trophic levels and influence ecosystem properties. Variation in plant functional traits, and trait syndromes, has proven useful for tackling many important ecological questions at a range of scales, giving rise to a demand for standardised ways to measure ecologically meaningful plant traits. This line of research has been among the most fruitful avenues for understanding ecological and evolutionary patterns and processes. It also has the potential both to build a predictive set of local, regional and global relationships between plants and environment and to quantify a wide range of natural and human-driven processes, including changes in biodiversity, the impacts of species invasions, alterations in biogeochemical processes and vegetation–atmosphere interactions. The importance of these topics dictates the urgent need for more and better data, and increases the value of standardised protocols for quantifying trait variation of different species, in particular for traits with power to predict plant- and ecosystem-level processes, and for traits that can be measured relatively easily. Updated and expanded from the widely used previous version, this handbook retains the focus on clearly presented, widely applicable, step-by-step recipes, with a minimum of text on theory, and not only includes updated methods for the traits previously covered, but also introduces many new protocols for further traits. This new handbook has a better balance between whole-plant traits, leaf traits, root and stem traits and regenerative traits, and puts particular emphasis on traits important for predicting species’ effects on key ecosystem properties. We hope this new handbook becomes a standard companion in local and global efforts to learn about the responses and impacts of different plant species with respect to environmental changes in the present, past and future.

GLEAM v3: satellite-based land evaporation and root-zone soil moisture

Abstract: . The Global Land Evaporation Amsterdam Model (GLEAM) is a set of algorithms dedicated to the estimation of terrestrial evaporation and root-zone soil moisture from satellite data. Ever since its development in 2011, the model has been regularly revised, aiming at the optimal incorporation of new satellite-observed geophysical variables, and improving the representation of physical processes. In this study, the next version of this model (v3) is presented. Key changes relative to the previous version include (1) a revised formulation of the evaporative stress, (2) an optimized drainage algorithm, and (3) a new soil moisture data assimilation system. GLEAM v3 is used to produce three new data sets of terrestrial evaporation and root-zone soil moisture, including a 36-year data set spanning 1980–2015, referred to as v3a (based on satellite-observed soil moisture, vegetation optical depth and snow-water equivalent, reanalysis air temperature and radiation, and a multi-source precipitation product), and two satellite-based data sets. The latter share most of their forcing, except for the vegetation optical depth and soil moisture, which are based on observations from different passive and active C- and L-band microwave sensors (European Space Agency Climate Change Initiative, ESA CCI) for the v3b data set (spanning 2003–2015) and observations from the Soil Moisture and Ocean Salinity (SMOS) satellite in the v3c data set (spanning 2011–2015). Here, these three data sets are described in detail, compared against analogous data sets generated using the previous version of GLEAM (v2), and validated against measurements from 91 eddy-covariance towers and 2325 soil moisture sensors across a broad range of ecosystems. Results indicate that the quality of the v3 soil moisture is consistently better than the one from v2: average correlations against in situ surface soil moisture measurements increase from 0.61 to 0.64 in the case of the v3a data set and the representation of soil moisture in the second layer improves as well, with correlations increasing from 0.47 to 0.53. Similar improvements are observed for the v3b and c data sets. Despite regional differences, the quality of the evaporation fluxes remains overall similar to the one obtained using the previous version of GLEAM, with average correlations against eddy-covariance measurements ranging between 0.78 and 0.81 for the different data sets. These global data sets of terrestrial evaporation and root-zone soil moisture are now openly available at www.GLEAM.eu and may be used for large-scale hydrological applications, climate studies, or research on land–atmosphere feedbacks.

Ecosystem Ecology: The links between biodiversity, ecosystem services and human well-being

Abstract: No matter who we are, or where we live, our well-being depends on the way ecosystems work. Most obviously, ecosystems can provide us with material things that are essential for our daily lives, such as food, wood, wool and medicines. Although the other types of benefit we get from ecosystems are easily overlooked, they can, for example, also play an important role in regulating the environments in which we live. They can help ensure the flow of clean water and protect us from flooding or other hazards like soil erosion, land-slips and tsunamis. They can even contribute to our spiritual well-being, through their cultural or religious significance or the opportunities they provide for recreation or the enjoyment of nature.

Global land-surface evaporation estimated from satellite-based observations

Abstract: . This paper outlines a new strategy to derive evaporation from satellite observations. The approach uses a variety of satellite-sensor products to estimate daily evaporation at a global scale and 0.25 degree spatial resolution. Central to this methodology is the use of the Priestley and Taylor (PT) evaporation model. The minimalistic PT equation combines a small number of inputs, the majority of which can be detected from space. This reduces the number of variables that need to be modelled. Key distinguishing features of the approach are the use of microwave-derived soil moisture, land surface temperature and vegetation density, as well as the detailed estimation of rainfall interception loss. The modelled evaporation is validated against one year of eddy covariance measurements from 43 stations. The estimated annual totals correlate well with the stations' annual cumulative evaporation (R=0.80, N=43) and present a low average bias (−5%). The validation of the daily time series at each individual station shows good model performance in all vegetation types and climate conditions with an average correlation coefficient of R =0.83, still lower than the R =0.90 found in the validation of the monthly time series. The first global map of annual evaporation developed through this methodology is also presented.

‘Breathing’ of the terrestrial biosphere: lessons learned from a global network of carbon dioxide flux measurement systems

Abstract: Published eddy covariance measurements of carbon dioxide (CO2) exchange between vegetation and the atmosphere from a global network are distilled, synthesised and reviewed according to time scale, climate and plant functional types, disturbance and land use. Other topics discussed include history of the network, errors and issues associated with the eddy covariance method, and a synopsis of how these data are being used by ecosystem and climate modellers and the remote-sensing community. Spatial and temporal differences in net annual exchange, FN, result from imbalances in canopy photosynthesis (FA) and ecosystem respiration (FR), which scale closely with one another on annual time scales. Key findings reported include the following: (1) ecosystems with the greatest net carbon uptake have the longest growing season, not the greatest FA; (2) ecosystems losing carbon were recently disturbed; (3) many old-growth forests act as carbon sinks; and (4) year-to-year decreases in FN are attributed to a suite of stresses that decrease FA and FR in tandem. Short-term flux measurements revealed emergent-scale processes including (1) the enhancement of light use efficiency by diffuse light, (2) dynamic pulses in FR following rain and (3) the acclimation FA and FR to temperature. They also quantify how FA and FR respond to droughts and heat spells.