Jun Cui

Bio: Jun Cui is an academic researcher from Sun Yat-sen University. The author has contributed to research in topics: Ionosphere & Martian. The author has an hindex of 47, co-authored 395 publications receiving 8949 citations. Previous affiliations of Jun Cui include United States Department of Energy & General Electric.

Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)

Abstract: In 2008, we published the first set of guidelines for standardizing research in autophagy. Since then, this topic has received increasing attention, and many scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Thus, it is important to formulate on a regular basis updated guidelines for monitoring autophagy in different organisms. Despite numerous reviews, there continues to be confusion regarding acceptable methods to evaluate autophagy, especially in multicellular eukaryotes. Here, we present a set of guidelines for investigators to select and interpret methods to examine autophagy and related processes, and for reviewers to provide realistic and reasonable critiques of reports that are focused on these processes. These guidelines are not meant to be a dogmatic set of rules, because the appropriateness of any assay largely depends on the question being asked and the system being used. Moreover, no individual assay is perfect for every situation, calling for the use of multiple techniques to properly monitor autophagy in each experimental setting. Finally, several core components of the autophagy machinery have been implicated in distinct autophagic processes (canonical and noncanonical autophagy), implying that genetic approaches to block autophagy should rely on targeting two or more autophagy-related genes that ideally participate in distinct steps of the pathway. Along similar lines, because multiple proteins involved in autophagy also regulate other cellular pathways including apoptosis, not all of them can be used as a specific marker for bona fide autophagic responses. Here, we critically discuss current methods of assessing autophagy and the information they can, or cannot, provide. Our ultimate goal is to encourage intellectual and technical innovation in the field.

Effects of straw carbon input on carbon dynamics in agricultural soils: a meta-analysis.

Abstract: Straw return has been widely recommended as an environmentally friendly practice to manage carbon (C) sequestration in agricultural ecosystems. However, the overall trend and magnitude of changes in soil C in response to straw return remain uncertain. In this meta-analysis, we calculated the response ratios of soil organic C (SOC) concentrations, greenhouse gases (GHGs) emission, nutrient contents and other important soil properties to straw addition in 176 published field studies. Our results indicated that straw return significantly increased SOC concentration by 12.8 ± 0.4% on average, with a 27.4 ± 1.4% to 56.6 ± 1.8% increase in soil active C fraction. CO2 emission increased in both upland (27.8 ± 2.0%) and paddy systems (51.0 ± 2.0%), while CH4 emission increased by 110.7 ± 1.2% only in rice paddies. N2O emission has declined by 15.2 ± 1.1% in paddy soils but increased by 8.3 ± 2.5% in upland soils. Responses of macro-aggregates and crop yield to straw return showed positively linear with increasing SOC concentration. Straw-C input rate and clay content significantly affected the response of SOC. A significant positive relationship was found between annual SOC sequestered and duration, suggesting that soil C saturation would occur after 12 years under straw return. Overall, straw return was an effective means to improve SOC accumulation, soil quality, and crop yield. Straw return-induced improvement of soil nutrient availability may favor crop growth, which can in turn increase ecosystem C input. Meanwhile, the analysis on net global warming potential (GWP) balance suggested that straw return increased C sink in upland soils but increased C source in paddy soils due to enhanced CH4 emission. Our meta-analysis suggested that future agro-ecosystem models and cropland management should differentiate the effects of straw return on ecosystem C budget in upland and paddy soils.

Combinatorial search of thermoelastic shape-memory alloys with extremely small hysteresis width

Abstract: Reversibility of structural phase transformations has profound technological implications in a wide range of applications from fatigue life in shape-memory alloys (SMAs) to magnetism in multiferroic oxides. The geometric nonlinear theory of martensite universally applicable to all structural transitions has been developed. It predicts the reversibility of the transitions as manifested in the hysteresis behaviour based solely on crystal symmetry and geometric compatibilities between phases. In this article, we report on the verification of the theory using the high-throughput approach. The thin-film composition-spread technique was devised to rapidly map the lattice parameters and the thermal hysteresis of ternary alloy systems. A clear relationship between the hysteresis and the middle eigenvalue of the transformation stretch tensor as predicted by the theory was observed for the first time. We have also identified a new composition region of titanium-rich SMAs with potential for improved control of SMA properties.

Demonstration of high efficiency elastocaloric cooling with large ΔT using NiTi wires

Abstract: Vapor compression (VC) is by far the most dominant technology for meeting all cooling and refrigeration needs around the world. It is a mature technology with the efficiency of modern compressors approaching the theoretical limit, but its environmental footprint remains a global problem. VC refrigerants such as hydrochloroflurocarbons (HCFCs) and hydrofluorocarbons (HFCs) are a significant source of green house gas emissions, and their global warming potential (GWP) is as high as 1000 times that of CO2 [Buildings Energy Data Book (Building Technologies Program, Department of Energy, 2009)]. There is an urgent need to develop an alternative high-efficiency cooling technology that is affordable and environmentally friendly [A. D. Little, Report For Office of Building Technology State and Community Programs, Department of Energy, 2001]. Here, we demonstrate that elastocaloric cooling (EC), a type of solid-state cooling mechanism based on the latent heat of reversible martensitic transformation, can have the coefficient of performance as high as ≈11, with a directly measured ΔT of 17 °C. The solid-state refrigerant of EC completely eliminates the use of any GWP refrigerants including HCFCs/HFCs.

I and i

Abstract: There is, I think, something ethereal about i —the square root of minus one. I remember first hearing about it at school. It seemed an odd beast at that time—an intruder hovering on the edge of reality. Usually familiarity dulls this sense of the bizarre, but in the case of i it was the reverse: over the years the sense of its surreal nature intensified. It seemed that it was impossible to write mathematics that described the real world in …

Clinical course and risk factors for mortality of adult inpatients with COVID-19 in Wuhan, China: a retrospective cohort study

Abstract: Summary Background Since December, 2019, Wuhan, China, has experienced an outbreak of coronavirus disease 2019 (COVID-19), caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Epidemiological and clinical characteristics of patients with COVID-19 have been reported but risk factors for mortality and a detailed clinical course of illness, including viral shedding, have not been well described. Methods In this retrospective, multicentre cohort study, we included all adult inpatients (≥18 years old) with laboratory-confirmed COVID-19 from Jinyintan Hospital and Wuhan Pulmonary Hospital (Wuhan, China) who had been discharged or had died by Jan 31, 2020. Demographic, clinical, treatment, and laboratory data, including serial samples for viral RNA detection, were extracted from electronic medical records and compared between survivors and non-survivors. We used univariable and multivariable logistic regression methods to explore the risk factors associated with in-hospital death. Findings 191 patients (135 from Jinyintan Hospital and 56 from Wuhan Pulmonary Hospital) were included in this study, of whom 137 were discharged and 54 died in hospital. 91 (48%) patients had a comorbidity, with hypertension being the most common (58 [30%] patients), followed by diabetes (36 [19%] patients) and coronary heart disease (15 [8%] patients). Multivariable regression showed increasing odds of in-hospital death associated with older age (odds ratio 1·10, 95% CI 1·03–1·17, per year increase; p=0·0043), higher Sequential Organ Failure Assessment (SOFA) score (5·65, 2·61–12·23; p Interpretation The potential risk factors of older age, high SOFA score, and d-dimer greater than 1 μg/mL could help clinicians to identify patients with poor prognosis at an early stage. Prolonged viral shedding provides the rationale for a strategy of isolation of infected patients and optimal antiviral interventions in the future. Funding Chinese Academy of Medical Sciences Innovation Fund for Medical Sciences; National Science Grant for Distinguished Young Scholars; National Key Research and Development Program of China; The Beijing Science and Technology Project; and Major Projects of National Science and Technology on New Drug Creation and Development.