Katka Havránková

Bio: Katka Havránková is an academic researcher from Academy of Sciences of the Czech Republic. The author has contributed to research in topics: Ecosystem & Ecosystem respiration. The author has an hindex of 1, co-authored 1 publications receiving 2424 citations.

On the Separation of Net Ecosystem Exchange into Assimilation and Ecosystem Respiration: Review and Improved Algorithm

Abstract: This paper discusses the advantages and disadvantages of the different methods that separate net ecosystem exchange (NEE) into its major components, gross ecosystem carbon uptake (GEP) and ecosystem respiration (Reco). In particular, we analyse the effect of the extrapolation of night-time values of ecosystem respiration into the daytime; this is usually done with a temperature response function that is derived from long-term data sets. For this analysis, we used 16 one-year-long data sets of carbon dioxide exchange measurements from European and US-American eddy covariance networks. These sites span from the boreal to Mediterranean climates, and include deciduous and evergreen forest, scrubland and crop ecosystems. We show that the temperature sensitivity of Reco, derived from long-term (annual) data sets, does not reflect the short-term temperature sensitivity that is effective when extrapolating from night- to daytime. Specifically, in summer active ecosystems the long

Europe-wide reduction in primary productivity caused by the heat and drought in 2003

Abstract: Future climate warming is expected to enhance plant growth in temperate ecosystems and to increase carbon sequestration. But although severe regional heatwaves may become more frequent in a changing climate their impact on terrestrial carbon cycling is unclear. Here we report measurements of ecosystem carbon dioxide fluxes, remotely sensed radiation absorbed by plants, and country-level crop yields taken during the European heatwave in 2003.We use a terrestrial biosphere simulation model to assess continental-scale changes in primary productivity during 2003, and their consequences for the net carbon balance. We estimate a 30 per cent reduction in gross primary productivity over Europe, which resulted in a strong anomalous net source of carbon dioxide (0.5 Pg Cyr21) to the atmosphere and reversed the effect of four years of net ecosystem carbon sequestration. Our results suggest that productivity reduction in eastern and western Europe can be explained by rainfall deficit and extreme summer heat, respectively. We also find that ecosystem respiration decreased together with gross primary productivity, rather than accelerating with the temperature rise. Model results, corroborated by historical records of crop yields, suggest that such a reduction in Europe's primary productivity is unprecedented during the last century. An increase in future drought events could turn temperate ecosystems into carbon sources, contributing to positive carbon-climate feedbacks already anticipated in the tropics and at high latitudes.

Temperate forest trees and stands under severe drought: a review of ecophysiological responses, adaptation processes and long-term consequences

Abstract: La secheresse exceptionnelle de 2003 a ete l'occasion de faire le point de nos connaissances sur les mecanismes ecophysiologiques permettant aux arbres de traverser un tel evenement climatique extreme. L'analyse a ete conduite a l'echelle de l'arbre et du peuplement, tandis que l'intensite de la secheresse a ete quantifiee a l'aide d'un calcul de bilan hydrique sur neuf sites forestiers europeens contrastes du reseau CARBOEUROPE. Le role du couvert dans les echanges avec l'atmosphere est rappele puis integre dans l'analyse des reductions de bilan d'eau et de carbone en 2003 dus a la regulation stomatique. Les caracteristiques du complexe sol-racine, important a la fois pour l'acces a la ressource et a l'efficience de son absorption, constituent un des premiers traits d'adaptation a la secheresse. La reponse et les adaptations des especes ont surtout ete analysees en termes de diversite inter-specifique de fonctionnement hydraulique et du couplage entre proprietes hydrauliques et regulation stomatique. Enfin, nous discutons l'hypothese selon la quelle les dysfonctionnements hydrauliques ou les deficits de mise en reserve sont impliques dans les reactions differees de croissance, de developpement, d'induction de deperissement. Par exemple, des mesures de reserves glucidiques dans les troncs de chenes menees en fin d'ete 2003 ont permis de predire l'etat des couronnes des arbres au printemps 2004. Les faibles taux d'amidon etaient associes a une forte mortalite de branches et de jeunes pousses.

Towards a standardized processing of Net Ecosystem Exchange measured with eddy covariance technique: algorithms and uncertainty estimation

Abstract: . Eddy covariance technique to measure CO2, water and energy fluxes between biosphere and atmosphere is widely spread and used in various regional networks. Currently more than 250 eddy covariance sites are active around the world measuring carbon exchange at high temporal resolution for different biomes and climatic conditions. In this paper a new standardized set of corrections is introduced and the uncertainties associated with these corrections are assessed for eight different forest sites in Europe with a total of 12 yearly datasets. The uncertainties introduced on the two components GPP (Gross Primary Production) and TER (Terrestrial Ecosystem Respiration) are also discussed and a quantitative analysis presented. Through a factorial analysis we find that generally, uncertainties by different corrections are additive without interactions and that the heuristic u*-correction introduces the largest uncertainty. The results show that a standardized data processing is needed for an effective comparison across biomes and for underpinning inter-annual variability. The methodology presented in this paper has also been integrated in the European database of the eddy covariance measurements.

Modelling the role of agriculture for the 20th century global terrestrial carbon balance

Abstract: In order to better assess the role of agriculture within the global climate-vegetation system, we present a model of the managed planetary land surface, Lund-Potsdam-Jena managed Land (LPJmL), which simulates biophysical and biogeochemical processes as well as productivity and yield of the most important crops worldwide, using a concept of crop functional types (CFTs). Based on the LPJ-Dynamic Global Vegetation Model, LPJmL simulates the transient changes in carbon and water cycles due to land use, the specific phenology and seasonal CO2 fluxes of agricultural-dominated areas, and the production of crops and grazing land. It uses 13 CFTs (11 arable crops and two managed grass types), with specific parameterizations of phenology connected to leaf area development. Carbon is allocated daily towards four carbon pools, one being the yield-bearing storage organs. Management (irrigation, treatment of residues, intercropping) can be considered in order to capture their effect on productivity, on soil organic carbon and on carbon extracted from the ecosystem. For transient simulations for the 20th century, a global historical land use data set was developed, providing the annual cover fraction of the 13 CFTs, rain-fed and/or irrigated, within 0.5 degrees grid cells for the period 1901-2000, using published data on land use, crop distributions and irrigated areas. Several key results are compared with observations. The simulated spatial distribution of sowing dates for temperate cereals is comparable with the reported crop calendars. The simulated seasonal canopy development agrees better with satellite observations when actual cropland distribution is taken into account. Simulated yields for temperate cereals and maize compare well with FAO statistics. Monthly carbon fluxes measured at three agricultural sites also compare well with simulations. Global simulations indicate a similar to 24% (respectively similar to 10%) reduction in global vegetation (respectively soil) carbon due to agriculture, and 6-9 Pg C of yearly harvested biomass in the 1990s. In contrast to simulations of the potential natural vegetation showing the land biosphere to be an increasing carbon sink during the 20th century, LPJmL simulates a net carbon source until the 1970s (due to land use), and a small sink (mostly due to changing climate and CO2) after 1970. This is comparable with earlier LPJ simulations using a more simple land use scheme, and within the uncertainty range of estimates in the 1980s and 1990s. The fluxes attributed to land use change compare well with Houghton's estimates on the land use related fluxes until the 1970s, but then they begin to diverge, probably due to the different rates of deforestation considered. The simulated impacts of agriculture on the global water cycle for the 1990s are similar to 5% (respectively similar to 20%) reduction in transpiration (respectively interception), and similar to 44% increase in evaporation. Global runoff, which includes a simple irrigation scheme, is practically not affected. (Less)

‘Breathing’ of the terrestrial biosphere: lessons learned from a global network of carbon dioxide flux measurement systems

Abstract: Published eddy covariance measurements of carbon dioxide (CO2) exchange between vegetation and the atmosphere from a global network are distilled, synthesised and reviewed according to time scale, climate and plant functional types, disturbance and land use. Other topics discussed include history of the network, errors and issues associated with the eddy covariance method, and a synopsis of how these data are being used by ecosystem and climate modellers and the remote-sensing community. Spatial and temporal differences in net annual exchange, FN, result from imbalances in canopy photosynthesis (FA) and ecosystem respiration (FR), which scale closely with one another on annual time scales. Key findings reported include the following: (1) ecosystems with the greatest net carbon uptake have the longest growing season, not the greatest FA; (2) ecosystems losing carbon were recently disturbed; (3) many old-growth forests act as carbon sinks; and (4) year-to-year decreases in FN are attributed to a suite of stresses that decrease FA and FR in tandem. Short-term flux measurements revealed emergent-scale processes including (1) the enhancement of light use efficiency by diffuse light, (2) dynamic pulses in FR following rain and (3) the acclimation FA and FR to temperature. They also quantify how FA and FR respond to droughts and heat spells.