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Mark A. Watson

Other affiliations: University of Cambridge, Harvard University, University of Oslo  ...read more
Bio: Mark A. Watson is an academic researcher from Schrödinger. The author has contributed to research in topics: Density functional theory & Hybrid functional. The author has an hindex of 21, co-authored 32 publications receiving 4616 citations. Previous affiliations of Mark A. Watson include University of Cambridge & Harvard University.

Papers
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Journal ArticleDOI
TL;DR: A summary of the technical advances that are incorporated in the fourth major release of the Q-Chem quantum chemistry program is provided in this paper, covering approximately the last seven years, including developments in density functional theory and algorithms, nuclear magnetic resonance (NMR) property evaluation, coupled cluster and perturbation theories, methods for electronically excited and open-shell species, tools for treating extended environments, algorithms for walking on potential surfaces, analysis tools, energy and electron transfer modelling, parallel computing capabilities, and graphical user interfaces.
Abstract: A summary of the technical advances that are incorporated in the fourth major release of the Q-Chem quantum chemistry program is provided, covering approximately the last seven years. These include developments in density functional theory methods and algorithms, nuclear magnetic resonance (NMR) property evaluation, coupled cluster and perturbation theories, methods for electronically excited and open-shell species, tools for treating extended environments, algorithms for walking on potential surfaces, analysis tools, energy and electron transfer modelling, parallel computing capabilities, and graphical user interfaces. In addition, a selection of example case studies that illustrate these capabilities is given. These include extensive benchmarks of the comparative accuracy of modern density functionals for bonded and non-bonded interactions, tests of attenuated second order Moller–Plesset (MP2) methods for intermolecular interactions, a variety of parallel performance benchmarks, and tests of the accuracy of implicit solvation models. Some specific chemical examples include calculations on the strongly correlated Cr_2 dimer, exploring zeolite-catalysed ethane dehydrogenation, energy decomposition analysis of a charged ter-molecular complex arising from glycerol photoionisation, and natural transition orbitals for a Frenkel exciton state in a nine-unit model of a self-assembling nanotube.

2,396 citations

Journal ArticleDOI
Kestutis Aidas1, Celestino Angeli2, Keld L. Bak3, Vebjørn Bakken4, Radovan Bast5, Linus Boman6, Ove Christiansen3, Renzo Cimiraglia2, Sonja Coriani7, Pål Dahle8, Erik K. Dalskov, Ulf Ekström4, Thomas Enevoldsen9, Janus J. Eriksen3, Patrick Ettenhuber3, Berta Fernández10, Lara Ferrighi, Heike Fliegl4, Luca Frediani, Kasper Hald11, Asger Halkier, Christof Hättig12, Hanne Heiberg13, Trygve Helgaker4, Alf C. Hennum14, Hinne Hettema15, Eirik Hjertenæs16, Stine Høst3, Ida-Marie Høyvik3, Maria Francesca Iozzi17, Brannislav Jansik18, Hans-Jørgen Aa. Jensen9, Dan Jonsson, Poul Jørgensen3, Johanna Kauczor19, Sheela Kirpekar, Thomas Kjærgaard3, Wim Klopper20, Stefan Knecht21, Rika Kobayashi22, Henrik Koch16, Jacob Kongsted9, Andreas Krapp, Kasper Kristensen3, Andrea Ligabue23, Ola B. Lutnæs24, Juan Ignacio Melo25, Kurt V. Mikkelsen26, Rolf H. Myhre16, Christian Neiss27, Christian B. Nielsen, Patrick Norman19, Jeppe Olsen3, Jógvan Magnus Haugaard Olsen9, Anders Osted, Martin J. Packer9, Filip Pawłowski28, Thomas Bondo Pedersen4, Patricio Federico Provasi29, Simen Reine4, Zilvinas Rinkevicius5, Torgeir A. Ruden, Kenneth Ruud, Vladimir V. Rybkin20, Paweł Sałek, Claire C. M. Samson20, Alfredo Sánchez de Merás30, Trond Saue31, Stephan P. A. Sauer26, Bernd Schimmelpfennig20, Kristian Sneskov11, Arnfinn Hykkerud Steindal, Kristian O. Sylvester-Hvid, Peter R. Taylor32, Andrew M. Teale33, Erik I. Tellgren4, David P. Tew34, Andreas J. Thorvaldsen3, Lea Thøgersen35, Olav Vahtras5, Mark A. Watson36, David J. D. Wilson37, Marcin Ziółkowski38, Hans Ågren5 
TL;DR: Dalton is a powerful general‐purpose program system for the study of molecular electronic structure at the Hartree–Fock, Kohn–Sham, multiconfigurational self‐consistent‐field, Møller–Plesset, configuration‐interaction, and coupled‐cluster levels of theory.
Abstract: Dalton is a powerful general-purpose program system for the study of molecular electronic structure at the Hartree-Fock, Kohn-Sham, multiconfigurational self-consistent-field, MOller-Plesset, confi ...

1,212 citations

Journal ArticleDOI
TL;DR: In this article, a fully analytical implementation of the nuclear magnetic resonance (NMR) indirect nuclear spin-spin coupling constants at the density-functional theory (DFT) level is presented.
Abstract: A fully analytical implementation of the nuclear magnetic resonance (NMR) indirect nuclear spin–spin coupling constants at the density-functional theory (DFT) level is presented. The implementation involves all four contributions of the nonrelativistic Ramsey theory: The dia- and para-magnetic spin–orbit contributions as well as the paramagnetic Fermi-contact and spin–dipole contributions. Three different exchange-correlation functionals—LDA (local density approximation), BLYP (Becke–Lee–Yang–Parr), and B3LYP (hybrid BLYP)—are tested by comparison with experiment and high-level ab initio calculations for a series of molecules containing first-row elements. All three levels of theory represent a significant improvement on restrictred Hartree–Fock (RHF) theory in the sense that the RHF instability problems are absent in DFT. Also, there is a steady improvement in the quality of the calculated spin–spin couplings in the sequence LDA, BLYP, and B3LYP. For the first-row molecules investigated by us, the hybrid...

323 citations

Journal ArticleDOI
Sheng Guo1, Mark A. Watson1, Weifeng Hu1, Qiming Sun1, Garnet Kin-Lic Chan1 
TL;DR: A combination of the DMRG and strongly contracted NEVPT 2 (DMRG-SC-NEVPT2) is presented that uses an efficient algorithm to compute high-order reduced-density matrices from D MRG wave functions.
Abstract: The strongly contracted variant of second-order N-electron valence state perturbation theory (NEVPT2) is an efficient perturbative method to treat dynamic correlation without the problems of intruder states or level shifts, while the density matrix renormalization group (DMRG) provides the capability to address static correlation in large active spaces. We present a combination of the DMRG and strongly contracted NEVPT2 (DMRG-SC-NEVPT2) that uses an efficient algorithm to compute high-order reduced-density matrices from DMRG wave functions. The capabilities of DMRG-SC-NEVPT2 are demonstrated on calculations of the chromium dimer potential energy curve at the basis set limit, and the excitation energies of a trimer model of poly(p-phenylenevinylene) (PPV(n = 3)).

169 citations

Journal ArticleDOI
TL;DR: A highly automated workflow designed to locate transition states for a given elementary reaction with minimal setup overhead is reported, demonstrating the utility and performance of the method in applications to transition state searches in reactions typical for organic chemistry, medicinal chemistry, and homogeneous catalysis research.
Abstract: Transition state search is at the center of multiple types of computational chemical predictions related to mechanistic investigations, reactivity and regioselectivity predictions, and catalyst design The process of finding transition states in practice is, however, a laborious multistep operation that requires significant user involvement Here, we report a highly automated workflow designed to locate transition states for a given elementary reaction with minimal setup overhead The only essential inputs required from the user are the structures of the separated reactants and products The seamless workflow combining computational technologies from the fields of cheminformatics, molecular mechanics, and quantum chemistry automatically finds the most probable correspondence between the atoms in the reactants and the products, generates a transition state guess, launches a transition state search through a combined approach involving the relaxing string method and the quadratic synchronous transit, and fi

113 citations


Cited by
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Journal ArticleDOI
TL;DR: This paper presents a meta-modelling procedure called "Continuum Methods within MD and MC Simulations 3072", which automates the very labor-intensive and therefore time-heavy and expensive process of integrating discrete and continuous components into a discrete-time model.
Abstract: 6.2.2. Definition of Effective Properties 3064 6.3. Response Properties to Magnetic Fields 3066 6.3.1. Nuclear Shielding 3066 6.3.2. Indirect Spin−Spin Coupling 3067 6.3.3. EPR Parameters 3068 6.4. Properties of Chiral Systems 3069 6.4.1. Electronic Circular Dichroism (ECD) 3069 6.4.2. Optical Rotation (OR) 3069 6.4.3. VCD and VROA 3070 7. Continuum and Discrete Models 3071 7.1. Continuum Methods within MD and MC Simulations 3072

13,286 citations

Book
01 Sep 2001
TL;DR: A Chemist's Guide to Density Functional Theory should be an invaluable source of insight and knowledge for many chemists using DFT approaches to solve chemical problems.
Abstract: "Chemists familiar with conventional quantum mechanics will applaud and benefit greatly from this particularly instructive, thorough and clearly written exposition of density functional theory: its basis, concepts, terms, implementation, and performance in diverse applications. Users of DFT for structure, energy, and molecular property computations, as well as reaction mechanism studies, are guided to the optimum choices of the most effective methods. Well done!" Paul von RaguE Schleyer "A conspicuous hole in the computational chemist's library is nicely filled by this book, which provides a wide-ranging and pragmatic view of the subject.[...It] should justifiably become the favorite text on the subject for practioneers who aim to use DFT to solve chemical problems." J. F. Stanton, J. Am. Chem. Soc. "The authors' aim is to guide the chemist through basic theoretical and related technical aspects of DFT at an easy-to-understand theoretical level. They succeed admirably." P. C. H. Mitchell, Appl. Organomet. Chem. "The authors have done an excellent service to the chemical community. [...] A Chemist's Guide to Density Functional Theory is exactly what the title suggests. It should be an invaluable source of insight and knowledge for many chemists using DFT approaches to solve chemical problems." M. Kaupp, Angew. Chem.

3,550 citations

Journal ArticleDOI
TL;DR: A summary of the technical advances that are incorporated in the fourth major release of the Q-Chem quantum chemistry program is provided in this paper, covering approximately the last seven years, including developments in density functional theory and algorithms, nuclear magnetic resonance (NMR) property evaluation, coupled cluster and perturbation theories, methods for electronically excited and open-shell species, tools for treating extended environments, algorithms for walking on potential surfaces, analysis tools, energy and electron transfer modelling, parallel computing capabilities, and graphical user interfaces.
Abstract: A summary of the technical advances that are incorporated in the fourth major release of the Q-Chem quantum chemistry program is provided, covering approximately the last seven years. These include developments in density functional theory methods and algorithms, nuclear magnetic resonance (NMR) property evaluation, coupled cluster and perturbation theories, methods for electronically excited and open-shell species, tools for treating extended environments, algorithms for walking on potential surfaces, analysis tools, energy and electron transfer modelling, parallel computing capabilities, and graphical user interfaces. In addition, a selection of example case studies that illustrate these capabilities is given. These include extensive benchmarks of the comparative accuracy of modern density functionals for bonded and non-bonded interactions, tests of attenuated second order Moller–Plesset (MP2) methods for intermolecular interactions, a variety of parallel performance benchmarks, and tests of the accuracy of implicit solvation models. Some specific chemical examples include calculations on the strongly correlated Cr_2 dimer, exploring zeolite-catalysed ethane dehydrogenation, energy decomposition analysis of a charged ter-molecular complex arising from glycerol photoionisation, and natural transition orbitals for a Frenkel exciton state in a nine-unit model of a self-assembling nanotube.

2,396 citations

01 Jan 2015
TL;DR: Detailed benchmarks of the comparative accuracy of modern density functionals for bonded and non-bonded interactions, tests of attenuated second order Møller–Plesset methods for intermolecular interactions, and tests of the accuracy of implicit solvation models are provided.
Abstract: A summary of the technical advances that are incorporated in the fourth major release of the Q-Chem quantum chemistry program is provided, covering approximately the last seven years. These include developments in density functional theory methods and algorithms, nuclear magnetic resonance (NMR) property evaluation, coupled cluster and perturbation theories, methods for electronically excited and open-shell species, tools for treating extended environments, algorithms for walking on potential surfaces, analysis tools, energy and electron transfer modelling, parallel computing capabilities, and graphical user interfaces. In addition, a selection of example case studies that illustrate these capabilities is given. These include extensive benchmarks of the comparative accuracy of modern density functionals for bonded and non-bonded interactions, tests of attenuated second order Møller–Plesset (MP2) methods for intermolecular interactions, a variety of parallel performance benchmarks, and tests of the accuracy of implicit solvation models. Some specific chemical examples include calculations on the strongly correlated Cr2 dimer, exploring zeolite-catalysed ethane dehydrogenation, energy decomposition analysis of a charged ter-molecular complex arising from glycerol photoionisation, and natural transition orbitals for a Frenkel exciton state in a nine-unit model of a self-assembling nanotube.

1,919 citations