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Mark Gerstein

Researcher at Yale University

Publications -  802
Citations -  172183

Mark Gerstein is an academic researcher from Yale University. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 168, co-authored 751 publications receiving 149578 citations. Previous affiliations of Mark Gerstein include Rutgers University & Structural Genomics Consortium.

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MOAT: efficient detection of highly mutated regions with the Mutations Overburdening Annotations Tool.

TL;DR: This work introduces Mutations Overburdening Annotations Tool (MOAT), a non‐parametric scheme that makes no assumptions about mutation process except requiring that the BMR changes smoothly with genomic features.
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Reads meet rotamers: structural biology in the age of deep sequencing

TL;DR: Within structural biology there is less emphasis on the discovery of novel folds and more on relating structures to networks of protein interactions, covering this changing mindset here.
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Corrigendum: Performance comparison of whole-genome sequencing platforms

TL;DR: In the version of this article initially published, the accession code to obtain raw sequence data was given as S RA045736.2; the correct code is SRA0457 36.2.
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An approach to comparing tiling array and high throughput sequencing technologies for genomic transcript mapping.

TL;DR: The approach to compare genome tiling microarray and MPSS sequencing data suggests that there is actually a reasonable overlap in transcripts identified by the two technologies, which is distorted by the scoring and thresholding in the tiling array scoring procedure.
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Novel transcribed regions in the human genome

TL;DR: Analysis of the mapping results of RNA isolated from five cell/tissue types, NB4 cells, NB 4 cells treated with retinoic acid, neutrophils, and placenta, throughout the ENCODE region reveals a large number of novel transcribed regions, which suggest that many of the novel transcription regions may have a functional role.