M
Mark Lipson
Researcher at Massachusetts Institute of Technology
Publications - 27
Citations - 4459
Mark Lipson is an academic researcher from Massachusetts Institute of Technology. The author has contributed to research in topics: Population & Genetic distance. The author has an hindex of 17, co-authored 24 publications receiving 3697 citations. Previous affiliations of Mark Lipson include Harvard University.
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Journal ArticleDOI
Ancient human genomes suggest three ancestral populations for present-day Europeans
Iosif Lazaridis,Iosif Lazaridis,Nick Patterson,Alissa Mittnik,Gabriel Renaud,Swapan Mallick,Swapan Mallick,Karola Kirsanow,Peter H. Sudmant,Joshua G. Schraiber,Joshua G. Schraiber,Sergi Castellano,Mark Lipson,Bonnie Berger,Bonnie Berger,Christos Economou,Ruth Bollongino,Qiaomei Fu,Kirsten I. Bos,Susanne Nordenfelt,Susanne Nordenfelt,Heng Li,Heng Li,Cesare de Filippo,Kay Prüfer,Susanna Sawyer,Cosimo Posth,Wolfgang Haak,Fredrik Hallgren,Elin Fornander,Nadin Rohland,Nadin Rohland,Dominique Delsate,Michael Francken,Jean-Michel Guinet,Joachim Wahl,George Ayodo,Hamza A. Babiker,Hamza A. Babiker,Graciela Bailliet,Elena Balanovska,Oleg Balanovsky,Ramiro Barrantes,Gabriel Bedoya,Haim Ben-Ami,Judit Bene,Fouad Berrada,Claudio M. Bravi,Francesca Brisighelli,George B.J. Busby,Francesco Calì,Mikhail Churnosov,David E. C. Cole,Daniel Corach,Larissa Damba,George van Driem,Stanislav Dryomov,Jean-Michel Dugoujon,Sardana A. Fedorova,Irene Gallego Romero,Marina Gubina,Michael F. Hammer,Brenna M. Henn,Tor Hervig,Ugur Hodoglugil,Aashish R. Jha,Sena Karachanak-Yankova,Rita Khusainova,Elza Khusnutdinova,Rick A. Kittles,Toomas Kivisild,William Klitz,Vaidutis Kučinskas,Alena Kushniarevich,Leila Laredj,Sergey Litvinov,Theologos Loukidis,Theologos Loukidis,Robert W. Mahley,Béla Melegh,Ene Metspalu,Julio Molina,Joanna L. Mountain,Klemetti Näkkäläjärvi,Desislava Nesheva,Thomas B. Nyambo,Ludmila P. Osipova,Jüri Parik,Fedor Platonov,Olga L. Posukh,Valentino Romano,Francisco Rothhammer,Francisco Rothhammer,Igor Rudan,Ruslan Ruizbakiev,Hovhannes Sahakyan,Hovhannes Sahakyan,Antti Sajantila,Antonio Salas,Elena B. Starikovskaya,Ayele Tarekegn,Draga Toncheva,Shahlo Turdikulova,Ingrida Uktveryte,Olga Utevska,René Vasquez,Mercedes Villena,Mikhail Voevoda,Cheryl A. Winkler,Levon Yepiskoposyan,Pierre Zalloua,Pierre Zalloua,Tatijana Zemunik,Alan Cooper,Cristian Capelli,Mark G. Thomas,Andres Ruiz-Linares,Sarah A. Tishkoff,Lalji Singh,Kumarasamy Thangaraj,Richard Villems,Richard Villems,Richard Villems,David Comas,Rem I. Sukernik,Mait Metspalu,Matthias Meyer,Evan E. Eichler,Joachim Burger,Montgomery Slatkin,Svante Pääbo,Janet Kelso,David Reich,David Reich,David Reich,Johannes Krause,Johannes Krause +136 more
TL;DR: It is shown that most present-day Europeans derive from at least three highly differentiated populations: west European hunter-gatherers, who contributed ancestry to all Europeans but not to Near Easterners; ancient north Eurasians related to Upper Palaeolithic Siberians; and early European farmers, who were mainly of Near Eastern origin but also harboured west Europeanhunter-gatherer related ancestry.
Ancient human genomes suggest three ancestral populations for present-day Europeans
Iosif Lazaridis,Iosif Lazaridis,Nick Patterson,Alissa Mittnik,Gabriel Renaud,Swapan Mallick,Swapan Mallick,Karola Kirsanow,Peter H. Sudmant,Joshua G. Schraiber,Joshua G. Schraiber,Sergi Castellano,Mark Lipson,Bonnie Berger,Bonnie Berger,Christos Economou,Ruth Bollongino,Qiaomei Fu,Kirsten I. Bos,Susanne Nordenfelt,Susanne Nordenfelt,Heng Li,Heng Li,Cesare de Filippo,Kay Prüfer,Susanna Sawyer,Cosimo Posth,Wolfgang Haak,Fredrik Hallgren,Elin Fornander,Nadin Rohland,Nadin Rohland,Dominique Delsate,Michael Francken,Jean-Michel Guinet,Joachim Wahl,George Ayodo,Hamza A. Babiker,Hamza A. Babiker,Graciela Bailliet,Elena Balanovska,Oleg Balanovsky,Ramiro Barrantes,Gabriel Bedoya,Haim Ben-Ami,Judit Bene,Fouad Berrada,Claudio M. Bravi,Francesca Brisighelli,George B.J. Busby,Francesco Calì,Mikhail Churnosov,David E. C. Cole,Daniel Corach,Larissa Damba,George van Driem,Stanislav Dryomov,Jean-Michel Dugoujon,Sardana A. Fedorova,Irene Gallego Romero,Marina Gubina,Michael F. Hammer,Brenna M. Henn,Tor Hervig,Ugur Hodoglugil,Aashish R. Jha,Sena Karachanak-Yankova,Rita Khusainova,Elza Khusnutdinova,Rick A. Kittles,Toomas Kivisild,William Klitz,Vaidutis Kučinskas,Alena Kushniarevich,Leila Laredj,Sergey Litvinov,Theologos Loukidis,Theologos Loukidis,Robert W. Mahley,Béla Melegh,Ene Metspalu,Julio Molina,Joanna L. Mountain,Klemetti Näkkäläjärvi,Desislava Nesheva,Thomas B. Nyambo,Ludmila P. Osipova,Jüri Parik,Fedor Platonov,Olga L. Posukh,Valentino Romano,Francisco Rothhammer,Francisco Rothhammer,Igor Rudan,Ruslan Ruizbakiev,Hovhannes Sahakyan,Hovhannes Sahakyan,Antti Sajantila,Antonio Salas,Elena B. Starikovskaya,Ayele Tarekegn,Draga Toncheva,Shahlo Turdikulova,Ingrida Uktveryte,Olga Utevska,René Vasquez,Mercedes Villena,Mikhail Voevoda,Cheryl A. Winkler,Levon Yepiskoposyan,Pierre Zalloua,Pierre Zalloua,Tatijana Zemunik,Alan Cooper,Cristian Capelli,Mark G. Thomas,Andres Ruiz-Linares,Sarah A. Tishkoff,Lalji Singh,Kumarasamy Thangaraj,Richard Villems,Richard Villems,Richard Villems,David Comas,Rem I. Sukernik,Mait Metspalu,Matthias Meyer,Evan E. Eichler,Joachim Burger,Montgomery Slatkin,Svante Pääbo,Janet Kelso,David Reich,David Reich,David Reich,Johannes Krause,Johannes Krause +136 more
TL;DR: The authors showed that most present-day Europeans derive from at least three highly differentiated populations: west European hunter-gatherers, ancient north Eurasians related to Upper Palaeolithic Siberians, who contributed to both Europeans and Near Easterners; and early European farmers, who were mainly of Near Eastern origin but also harboured west European hunters-gatherer related ancestry.
Journal ArticleDOI
Inferring Admixture Histories of Human Populations Using Linkage Disequilibrium
Po-Ru Loh,Mark Lipson,Nick Patterson,Priya Moorjani,Priya Moorjani,Joseph K. Pickrell,David Reich,David Reich,Bonnie Berger,Bonnie Berger +9 more
TL;DR: In this paper, a new approach harnesses the exponential decay of admixture-induced linkage disequilibrium (LD) as a function of genetic distance, which can be used to infer mixture proportions as well as dates with fewer constraints on reference populations.
Journal ArticleDOI
The Formation of Human Populations in South and Central Asia
Vagheesh M. Narasimhan,Nick Patterson,Nick Patterson,Priya Moorjani,Nadin Rohland,Nadin Rohland,Rebecca Bernardos,Swapan Mallick,Swapan Mallick,Swapan Mallick,Iosif Lazaridis,Nathan Nakatsuka,Nathan Nakatsuka,Iñigo Olalde,Mark Lipson,Alexander M. Kim,Luca M. Olivieri,Alfredo Coppa,Massimo Vidale,James Mallory,Vyacheslav Moiseyev,Egor Kitov,Egor Kitov,Janet Monge,Nicole Adamski,Nicole Adamski,Neel Alex,Nasreen Broomandkhoshbacht,Nasreen Broomandkhoshbacht,Francesca Candilio,Kimberly Callan,Kimberly Callan,Olivia Cheronet,Olivia Cheronet,Brendan J. Culleton,Matthew Ferry,Matthew Ferry,Daniel Fernandes,Suzanne Freilich,Beatriz Gamarra,Daniel Gaudio,Mateja Hajdinjak,Eadaoin Harney,Eadaoin Harney,Thomas K. Harper,Denise Keating,Ann Marie Lawson,Ann Marie Lawson,Matthew Mah,Matthew Mah,Matthew Mah,Kirsten Mandl,Megan Michel,Megan Michel,Mario Novak,Jonas Oppenheimer,Jonas Oppenheimer,Niraj Rai,Niraj Rai,Kendra Sirak,Kendra Sirak,Kendra Sirak,Viviane Slon,Kristin Stewardson,Kristin Stewardson,Fatma Zalzala,Fatma Zalzala,Zhao Zhang,Gaziz Akhatov,Anatoly N. Bagashev,Alessandra Bagnera,Bauryzhan Baitanayev,Julio Bendezu-Sarmiento,Arman A. Bissembaev,Gian Luca Bonora,T Chargynov,T. A. Chikisheva,Petr K. Dashkovskiy,Anatoly P. Derevianko,Miroslav Dobeš,Katerina Douka,Katerina Douka,Nadezhda Dubova,Meiram N. Duisengali,Dmitry Enshin,Andrey Epimakhov,Alexey Fribus,Dorian Q. Fuller,Dorian Q. Fuller,Alexander Goryachev,Andrey Gromov,S. P. Grushin,Bryan Hanks,Margaret A. Judd,Erlan Kazizov,Aleksander Khokhlov,Aleksander P. Krygin,Elena Kupriyanova,Pavel Kuznetsov,Donata Luiselli,Farhod Maksudov,Aslan M. Mamedov,Talgat B. Mamirov,Christopher Meiklejohn,Deborah C. Merrett,Roberto Micheli,Oleg Mochalov,Samariddin Mustafokulov,Ayushi Nayak,Davide Pettener,Richard Potts,Dmitry Razhev,Marina Petrovna Rykun,Stefania Sarno,Tatyana M. Savenkova,Kulyan Sikhymbaeva,Sergey Mikhailovich Slepchenko,Oroz A. Soltobaev,Nadezhda Stepanova,Svetlana V. Svyatko,Svetlana V. Svyatko,Kubatbek Tabaldiev,Maria Teschler-Nicola,Maria Teschler-Nicola,Alexey A. Tishkin,Vitaly V. Tkachev,Sergey Vasilyev,Petr Velemínský,Dmitriy Voyakin,Antonina Yermolayeva,Muhammad Zahir,Muhammad Zahir,Valery S. Zubkov,A. V. Zubova,Vasant Shinde,Carles Lalueza-Fox,Matthias Meyer,David W. Anthony,Nicole Boivin,Kumarasamy Thangaraj,Douglas J. Kennett,Douglas J. Kennett,Michael D. Frachetti,Ron Pinhasi,Ron Pinhasi,David Reich +145 more
TL;DR: It is shown that Steppe ancestry then integrated further south in the first half of the second millennium BCE, contributing up to 30% of the ancestry of modern groups in South Asia, supporting the idea that the archaeologically documented dispersal of domesticates was accompanied by the spread of people from multiple centers of domestication.
Posted Content
Inferring Admixture Histories of Human Populations Using Linkage Disequilibrium
Po-Ru Loh,Mark Lipson,Nick Patterson,Priya Moorjani,Priya Moorjani,Joseph K. Pickrell,David Reich,David Reich,Bonnie Berger,Bonnie Berger +9 more
TL;DR: A new weighted LD statistic is presented that can be used to infer mixture proportions as well as dates with fewer constraints on reference populations than previous methods and can uncover phylogenetic relationships among populations by comparing weighted LD curves obtained using a suite of references.