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Martin Maška
Researcher at Masaryk University
Publications - 42
Citations - 2368
Martin Maška is an academic researcher from Masaryk University. The author has contributed to research in topics: Image segmentation & Real image. The author has an hindex of 13, co-authored 40 publications receiving 1862 citations. Previous affiliations of Martin Maška include University of Navarra.
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Journal ArticleDOI
Objective comparison of particle tracking methods
Nicolas Chenouard,Ihor Smal,Fabrice de Chaumont,Martin Maška,Martin Maška,Ivo F. Sbalzarini,Yuanhao Gong,Janick Cardinale,Craig Carthel,Stefano Coraluppi,Mark R. Winter,Andrew R. Cohen,William J. Godinez,Karl Rohr,Yannis Kalaidzidis,Liang Liang,James S. Duncan,Hongying Shen,Yingke Xu,Klas E. G. Magnusson,Joakim Jalden,Helen M. Blau,Perrine Paul-Gilloteaux,Philippe Roudot,Charles Kervrann,François Waharte,Jean-Yves Tinevez,Spencer L. Shorte,Joost Willemse,Katherine Celler,Gilles P. van Wezel,Han-Wei Dan,Yuh-Show Tsai,Carlos Ortiz de Solórzano,Jean-Christophe Olivo-Marin,Erik Meijering +35 more
TL;DR: Although no single method performed best across all scenarios, the results revealed clear differences between the various approaches, leading to notable practical conclusions for users and developers.
Journal ArticleDOI
An objective comparison of cell-tracking algorithms
Vladimír Ulman,Martin Maška,Klas E. G. Magnusson,Olaf Ronneberger,Carsten Haubold,Nathalie Harder,Pavel Matula,Petr Matula,David Svoboda,Miroslav Radojevic,Ihor Smal,Karl Rohr,Joakim Jalden,Helen M. Blau,Oleh Dzyubachyk,Boudewijn P. F. Lelieveldt,Boudewijn P. F. Lelieveldt,Pengdong Xiao,Yuexiang Li,Siu-Yeung Cho,Alexandre Dufour,Jean-Christophe Olivo-Marin,Constantino Carlos Reyes-Aldasoro,Jose Alonso Solis-Lemus,Robert Bensch,Thomas Brox,Johannes Stegmaier,Ralf Mikut,Steffen Wolf,Fred A. Hamprecht,Tiago Esteves,Pedro Quelhas,Omer Burak Demirel,Lars Malmström,Florian Jug,Pavel Tomancak,Erik Meijering,Arrate Muñoz-Barrutia,Michal Kozubek,Carlos Ortiz-de-Solorzano +39 more
TL;DR: It is found that methods that either take prior information into account using learning strategies or analyze cells in a global spatiotemporal video context performed better than other methods under the segmentation and tracking scenarios included in the Cell Tracking Challenge.
Journal ArticleDOI
A benchmark for comparison of cell tracking algorithms
Martin Maška,Vladimír Ulman,David Svoboda,Pavel Matula,Petr Matula,Cristina Ederra,Ainhoa Urbiola,Tomás España,Subramanian Venkatesan,Deepak M.W. Balak,Pavel Karas,Tereza Bolcková,Markéta Štreitová,Craig Carthel,Stefano Coraluppi,Nathalie Harder,Karl Rohr,Klas E. G. Magnusson,Joakim Jalden,Helen M. Blau,Oleh Dzyubachyk,Pavel Křížek,Guy M. Hagen,David Pastor-Escuredo,Daniel Jimenez-Carretero,Maria J. Ledesma-Carbayo,Arrate Muñoz-Barrutia,Erik Meijering,Michal Kozubek,Carlos Ortiz-de-Solorzano +29 more
TL;DR: Six algorithms covering a variety of segmentation and tracking paradigms have been compared and ranked based on their performance on both synthetic and real datasets in the Cell Tracking Challenge.
Journal ArticleDOI
Characterization of three-dimensional cancer cell migration in mixed collagen-Matrigel scaffolds using microfluidics and image analysis.
Maria Anguiano,Carlos Castilla,Martin Maška,Cristina Ederra,Rafael Peláez,Xabier Morales,Gorka Muñoz-Arrieta,Maite Mujika,Michal Kozubek,Arrate Muñoz-Barrutia,Ana Rouzaut,Sergio Arana,José Manuel García-Aznar,Carlos Ortiz-de-Solorzano +13 more
TL;DR: A robust microfluidic platform and a set of software tools that can be used to study lung cancer cell migration under different microenvironments and experimental conditions are described and characterized.
Journal ArticleDOI
Segmentation and Shape Tracking of Whole Fluorescent Cells Based on the Chan–Vese Model
Martin Maška,Ondrej Danek,Saray Garasa,Ana Rouzaut,Arrate Muñoz-Barrutia,Carlos Ortiz-de-Solorzano +5 more
TL;DR: A fast and robust approach to tracking the evolving shape of whole fluorescent cells in time-lapse series by minimizing the Chan-Vese model in the fast level set-like and graph cut frameworks.