M
Mathias Brochhausen
Researcher at University of Arkansas for Medical Sciences
Publications - 89
Citations - 1370
Mathias Brochhausen is an academic researcher from University of Arkansas for Medical Sciences. The author has contributed to research in topics: Ontology (information science) & Open Biomedical Ontologies. The author has an hindex of 19, co-authored 80 publications receiving 1135 citations. Previous affiliations of Mathias Brochhausen include University of Florida & Saarland University.
Papers
More filters
Journal ArticleDOI
The Ontology for Biomedical Investigations
Anita Bandrowski,Ryan R. Brinkman,Mathias Brochhausen,Matthew H. Brush,Bill Bug,Marcus C. Chibucos,Kevin Clancy,Mélanie Courtot,Dirk Derom,Michel Dumontier,Liju Fan,Jennifer Fostel,Gilberto Fragoso,Frank Gibson,Alejandra Gonzalez-Beltran,Melissa A. Haendel,Yongqun He,Mervi Heiskanen,Tina Hernandez-Boussard,Mark Jensen,Yu Lin,Allyson L. Lister,Phillip Lord,James Malone,Elisabetta Manduchi,Monnie McGee,Norman Morrison,James A. Overton,Helen Parkinson,Bjoern Peters,Philippe Rocca-Serra,Alan Ruttenberg,Susanna-Assunta Sansone,Richard H. Scheuermann,Daniel Schober,Barry Smith,Larisa N. Soldatova,Christian J. Stoeckert,Chris F. Taylor,Carlo Torniai,Jessica A. Turner,Randi Vita,Patricia L. Whetzel,Jie Zheng +43 more
TL;DR: The state of OBI and several applications that are using it are described, such as adding semantic expressivity to existing databases, building data entry forms, and enabling interoperability between knowledge resources.
Journal ArticleDOI
Toward a complete dataset of drug-drug interaction information from publicly available sources
Serkan Ayvaz,John R. Horn,Oktie Hassanzadeh,Qian Zhu,Johann Stan,Nicholas P. Tatonetti,Santiago Vilar,Mathias Brochhausen,Matthias Samwald,Majid Rastegar-Mojarad,Michel Dumontier,Richard D. Boyce +11 more
TL;DR: It is thought that systems that provide access to the comprehensive lists, such as APIs into RxNorm, should be careful to inform users that the lists may be incomplete with respect to PDDIs that drug experts suggest clinicians be aware of.
Journal ArticleDOI
Building a drug ontology based on RxNorm and other sources
TL;DR: DrOn is a modular, extensible ontology of drug products, their ingredients, and their biological activity that avoids many of the fundamental flaws found in other, similar artifacts and meets the requirements of the comparative-effectiveness research use-case.
Journal ArticleDOI
The ACGT Master Ontology and its applications - Towards an ontology-driven cancer research and management system
Mathias Brochhausen,Andrew D. Spear,Cristian Cocos,Gabriele Weiler,Luis Martín,Alberto Anguita,Holger Stenzhorn,Evangelia Daskalaki,Fatima Schera,Ulf Schwarz,Stelios Sfakianakis,Stephan Kiefer,Martin Dörr,Norbert Graf,Manolis Tsiknakis +14 more
TL;DR: The ACGT Master Ontology is developed, a master ontology based on clearly defined principles of ontology development and evaluation, which is integrated into the design process of clinical trials in order to guarantee automatic semantic integration without the need to perform a separate mapping process.
Journal ArticleDOI
A Semantic Grid Infrastructure Enabling Integrated Access and Analysis of Multilevel Biomedical Data in Support of Postgenomic Clinical Trials on Cancer
Manolis Tsiknakis,Mathias Brochhausen,Jarek Nabrzyski,J. Pucacki,Stelios Sfakianakis,George Potamias,Christine Desmedt,Dimitris Kafetzopoulos +7 more
TL;DR: This paper provides a presentation of the needs of users involved in postgenomic CTs, and presents such needs in the form of scenarios, which drive the requirements engineering phase of the project.