M
Matthew J. Callow
Researcher at University of California, Berkeley
Publications - 31
Citations - 2828
Matthew J. Callow is an academic researcher from University of California, Berkeley. The author has contributed to research in topics: Nucleic acid & Sequencing by hybridization. The author has an hindex of 14, co-authored 31 publications receiving 2714 citations.
Papers
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Journal ArticleDOI
Human Genome Sequencing Using Unchained Base Reads on Self-Assembling DNA Nanoarrays
Radoje Drmanac,Andrew B. Sparks,Matthew J. Callow,Aaron L. Halpern,Norman L. Burns,Bahram G. Kermani,Paolo Carnevali,Igor Nazarenko,Geoffrey B. Nilsen,George Yeung,Fredrik A. Dahl,Andres Fernandez,Bryan Staker,Krishna Pant,Jonathan Baccash,Adam P. Borcherding,Anushka Brownley,Ryan J. Cedeno,Linsu Chen,Daniel F. Chernikoff,Alex Cheung,Razvan Chirita,Benjamin Curson,Jessica Ebert,Coleen R. Hacker,Robert Hartlage,Brian Hauser,Steve Huang,Yuan Jiang,Vitali Karpinchyk,Mark Koenig,Calvin Kong,Tom Landers,Catherine Le,Jia Liu,Celeste E. McBride,Matt Morenzoni,Robert E. Morey,Karl Mutch,Helena Perazich,Kimberly Perry,Brock A. Peters,Joe Peterson,Charit L. Pethiyagoda,Kaliprasad Pothuraju,Claudia Richter,Abraham M. Rosenbaum,Shaunak Roy,Jay Shafto,Uladzislau Sharanhovich,Karen W. Shannon,Conrad G. Sheppy,Michel Sun,Joseph V. Thakuria,Anne Tran,Dylan Vu,Alexander Wait Zaranek,Xiaodi Wu,Snezana Drmanac,Arnold R. Oliphant,William C. Banyai,Bruce L. Martin,Dennis G. Ballinger,George M. Church,Clifford Reid +64 more
TL;DR: A genome sequencing platform that achieves efficient imaging and low reagent consumption with combinatorial probe anchor ligation chemistry to independently assay each base from patterned nanoarrays of self-assembling DNA nanoballs is described.
Patent
Single Molecule Arrays for Genetic and Chemical Analysis
TL;DR: In this article, random arrays of single molecules are provided for carrying out large scale analyses, particularly of biomolecules, such as genomic DNA, cDNAs, proteins, and the like.
Journal ArticleDOI
A public resource facilitating clinical use of genomes
Madeleine Ball,Joseph V. Thakuria,Alexander Wait Zaranek,Tom Clegg,Abraham M. Rosenbaum,Xiaodi Wu,Misha Angrist,Jong Bhak,Jason Bobe,Matthew J. Callow,Carlos Cano,Michael F. Chou,Wendy K. Chung,Shawn M. Douglas,Preston W. Estep,Athurva Gore,Peter J. Hulick,Alberto Labarga,Je-Hyuk Lee,Jeantine E. Lunshof,Byung Chul Kim,Jong Il Kim,Zhe Li,Michael F. Murray,Geoffrey B. Nilsen,Brock A. Peters,Anugraha M. Raman,Hugh Y. Rienhoff,Kimberly Robasky,Matthew T. Wheeler,Ward Vandewege,Daniel B. Vorhaus,Joyce L. Yang,Luhan Yang,John Aach,Euan A. Ashley,Radoje Drmanac,Seong-Jin Kim,Jin Billy Li,Leonid Peshkin,Christine E. Seidman,Jeong-Sun Seo,Kun Zhang,Heidi L. Rehm,George M. Church +44 more
TL;DR: A peer production system for recording and organizing variant evaluations according to standard evidence guidelines is developed, creating a public forum for reaching consensus on interpretation of clinically relevant variants.
Patent
High throughput genome sequencing on dna arrays
TL;DR: In this paper, the authors present methods and compositions for acquiring nucleotide sequence information of target sequences using adaptors interspersed in target polynucleotides, such that there is an interruption of contiguous target sequence with the adaptors.
Journal ArticleDOI
Expression of human apolipoprotein B and assembly of lipoprotein(a) in transgenic mice
TL;DR: The successful expression of human apoB and the efficient assembly of Lp(a) in mice are demonstrated, demonstrating the ability of human proteins to be tightly associated with lipoproteins in the LDL density region.