Michael I. Jordan

Bio: Michael I. Jordan is an academic researcher from University of California, Berkeley. The author has contributed to research in topics: Computer science & Inference. The author has an hindex of 176, co-authored 1016 publications receiving 216204 citations. Previous affiliations of Michael I. Jordan include Stanford University & Princeton University.

Mixture representations for inference and learning in Boltzmann machines

Abstract: Boltzmann machines are undirected graphical models with two-state stochastic variables, in which the logarithms of the clique potentials are quadratic functions of the node states. They have been widely studied in the neural computing literature, although their practical applicability has been limited by the difficulty of finding an effective learning algorithm. One well-established approach, known as mean field theory, represents the stochastic distribution using a factorized approximation. However, the corresponding learning algorithm often fails to find a good solution. We conjecture that this is due to the implicit uni-modality of the mean field approximation which is therefore unable to capture multi-modality in the true distribution. In this paper we use variational methods to approximate the stochastic distribution using multi-modal mixtures of factorized distributions. We present results for both inference and learning to demonstrate the effectiveness of this approach.

A Million Cancer Genome Warehouse

Abstract: : This white paper discusses the motivation and issues surrounding the development of a repository and associated computational infrastructure to house and process a million genomes to help battle cancer, which we call the Million Cancer Genome Warehouse It is proposed as an example of an information commons and a computing system that will bring about precision medicine, coupling established clinical pathological indexes with state-of-the-art molecular profiling to create diagnostic, prognostic, and therapeutic strategies precisely tailored to each patient's individual requirements The goal of the white paper is to stimulate discussion so as to help reach consensus about the need to construct a Million Cancer Genome Warehouse and what its nature should be To try to anticipate concerns, including thorough cost estimates, it covers topics as varied as high-level health policy issues to low-level details about statistical analysis, data formats and structures, software design, and hardware construction and cost

On the Acceleration of the Sinkhorn and Greenkhorn Algorithms for Optimal Transport

Abstract: We propose and analyze a novel approach to accelerate the Sinkhorn and Greenkhorn algorithms for solving the entropic regularized optimal transport (OT) problems. Focusing on the discrete setting where the probability distributions have at most n atoms, and letting ε ∈ (0, 1) denote the tolerance, we introduce accelerated algorithms that have complexity bounds of Õ ( n/ε ) . This improves on the known complexity bound of Õ ( n/ε ) for the Sinkhorn and Greenkhorn algorithms. We also present two hybrid algorithms that use the new accelerated algorithms to initialize the Sinkhorn and Greenkhorn algorithms, and we establish complexity bounds of Õ ( n/ε ) for these hybrid algorithms. We provide an extensive experimental comparison on both synthetic and real datasets to explore the relative advantages of the new algorithms.

Heavy-Tailed Process Priors for Selective Shrinkage

Abstract: Heavy-tailed distributions are often used to enhance the robustness of regression and classification methods to outliers in output space. Often, however, we are confronted with "outliers" in input space, which are isolated observations in sparsely populated regions. We show that heavy-tailed stochastic processes (which we construct from Gaussian processes via a copula), can be used to improve robustness of regression and classification estimators to such outliers by selectively shrinking them more strongly in sparse regions than in dense regions. We carry out a theoretical analysis to show that selective shrinkage occurs when the marginals of the heavy-tailed process have sufficiently heavy tails. The analysis is complemented by experiments on biological data which indicate significant improvements of estimates in sparse regions while producing competitive results in dense regions.

Online control of the false discovery rate with decaying memory

Abstract: In the online multiple testing problem, p-values corresponding to different null hypotheses are observed one by one, and the decision of whether or not to reject the current hypothesis must be made immediately, after which the next p-value is observed. Alpha-investing algorithms to control the false discovery rate (FDR), formulated by Foster and Stine, have been generalized and applied to many settings, including quality-preserving databases in science and multiple A/B or multi-armed bandit tests for internet commerce. This paper improves the class of generalized alpha-investing algorithms (GAI) in four ways: (a) we show how to uniformly improve the power of the entire class of monotone GAI procedures by awarding more alpha-wealth for each rejection, giving a win-win resolution to a recent dilemma raised by Javanmard and Montanari, (b) we demonstrate how to incorporate prior weights to indicate domain knowledge of which hypotheses are likely to be non-null, (c) we allow for differing penalties for false discoveries to indicate that some hypotheses may be more important than others, (d) we define a new quantity called the decaying memory false discovery rate (mem-FDR) that may be more meaningful for truly temporal applications, and which alleviates problems that we describe and refer to as "piggybacking" and "alpha-death". Our GAI++ algorithms incorporate all four generalizations simultaneously, and reduce to more powerful variants of earlier algorithms when the weights and decay are all set to unity. Finally, we also describe a simple method to derive new online FDR rules based on an estimated false discovery proportion.

Going deeper with convolutions

Abstract: We propose a deep convolutional neural network architecture codenamed Inception that achieves the new state of the art for classification and detection in the ImageNet Large-Scale Visual Recognition Challenge 2014 (ILSVRC14). The main hallmark of this architecture is the improved utilization of the computing resources inside the network. By a carefully crafted design, we increased the depth and width of the network while keeping the computational budget constant. To optimize quality, the architectural decisions were based on the Hebbian principle and the intuition of multi-scale processing. One particular incarnation used in our submission for ILSVRC14 is called GoogLeNet, a 22 layers deep network, the quality of which is assessed in the context of classification and detection.

Deep Learning

Abstract: Deep learning is a form of machine learning that enables computers to learn from experience and understand the world in terms of a hierarchy of concepts. Because the computer gathers knowledge from experience, there is no need for a human computer operator to formally specify all the knowledge that the computer needs. The hierarchy of concepts allows the computer to learn complicated concepts by building them out of simpler ones; a graph of these hierarchies would be many layers deep. This book introduces a broad range of topics in deep learning. The text offers mathematical and conceptual background, covering relevant concepts in linear algebra, probability theory and information theory, numerical computation, and machine learning. It describes deep learning techniques used by practitioners in industry, including deep feedforward networks, regularization, optimization algorithms, convolutional networks, sequence modeling, and practical methodology; and it surveys such applications as natural language processing, speech recognition, computer vision, online recommendation systems, bioinformatics, and videogames. Finally, the book offers research perspectives, covering such theoretical topics as linear factor models, autoencoders, representation learning, structured probabilistic models, Monte Carlo methods, the partition function, approximate inference, and deep generative models. Deep Learning can be used by undergraduate or graduate students planning careers in either industry or research, and by software engineers who want to begin using deep learning in their products or platforms. A website offers supplementary material for both readers and instructors.

Reinforcement Learning: An Introduction

Abstract: Reinforcement learning, one of the most active research areas in artificial intelligence, is a computational approach to learning whereby an agent tries to maximize the total amount of reward it receives when interacting with a complex, uncertain environment. In Reinforcement Learning, Richard Sutton and Andrew Barto provide a clear and simple account of the key ideas and algorithms of reinforcement learning. Their discussion ranges from the history of the field's intellectual foundations to the most recent developments and applications. The only necessary mathematical background is familiarity with elementary concepts of probability. The book is divided into three parts. Part I defines the reinforcement learning problem in terms of Markov decision processes. Part II provides basic solution methods: dynamic programming, Monte Carlo methods, and temporal-difference learning. Part III presents a unified view of the solution methods and incorporates artificial neural networks, eligibility traces, and planning; the two final chapters present case studies and consider the future of reinforcement learning.

Latent dirichlet allocation

Abstract: We describe latent Dirichlet allocation (LDA), a generative probabilistic model for collections of discrete data such as text corpora. LDA is a three-level hierarchical Bayesian model, in which each item of a collection is modeled as a finite mixture over an underlying set of topics. Each topic is, in turn, modeled as an infinite mixture over an underlying set of topic probabilities. In the context of text modeling, the topic probabilities provide an explicit representation of a document. We present efficient approximate inference techniques based on variational methods and an EM algorithm for empirical Bayes parameter estimation. We report results in document modeling, text classification, and collaborative filtering, comparing to a mixture of unigrams model and the probabilistic LSI model.

Latent Dirichlet Allocation

Abstract: We propose a generative model for text and other collections of discrete data that generalizes or improves on several previous models including naive Bayes/unigram, mixture of unigrams [6], and Hof-mann's aspect model, also known as probabilistic latent semantic indexing (pLSI) [3]. In the context of text modeling, our model posits that each document is generated as a mixture of topics, where the continuous-valued mixture proportions are distributed as a latent Dirichlet random variable. Inference and learning are carried out efficiently via variational algorithms. We present empirical results on applications of this model to problems in text modeling, collaborative filtering, and text classification.