M
Michael Katinka
Researcher at Centre national de la recherche scientifique
Publications - 14
Citations - 6608
Michael Katinka is an academic researcher from Centre national de la recherche scientifique. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 13, co-authored 14 publications receiving 6142 citations. Previous affiliations of Michael Katinka include French Alternative Energies and Atomic Energy Commission & University of Évry Val d'Essonne.
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Journal ArticleDOI
Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype
Olivier Jaillon,Jean-Marc Aury,Frédéric Brunet,Jean-Louis Petit,Nicole Stange-Thomann,Evan Mauceli,Laurence Bouneau,Cécile Fischer,Catherine Ozouf-Costaz,Alain Bernot,Sophie Nicaud,David M. Jaffe,Sheila Fisher,Georges Lutfalla,Carole Dossat,Béatrice Segurens,Corinne Dasilva,Marcel Salanoubat,Michael Levy,Nathalie Boudet,Sergi Castellano,Véronique Anthouard,Claire Jubin,Vanina Castelli,Michael Katinka,Benoit Vacherie,Christian Biémont,Zineb Skalli,Laurence Cattolico,Julie Poulain,Véronique de Berardinis,Corinne Cruaud,Simone Duprat,Philippe Brottier,Jean-Pierre Coutanceau,Jérôme Gouzy,Genís Parra,Guillaume Lardier,Charles Chapple,Kevin McKernan,Paul A. McEwan,Stephanie Bosak,Manolis Kellis,Jean-Nicolas Volff,Roderic Guigó,Michael C. Zody,Jill P. Mesirov,Kerstin Lindblad-Toh,Bruce W. Birren,Chad Nusbaum,Daniel Kahn,Marc Robinson-Rechavi,Vincent Laudet,Vincent Schächter,Francis Quetier,William Saurin,Claude Scarpelli,Patrick Wincker,Eric S. Lander,Eric S. Lander,Jean Weissenbach,Hugues Roest Crollius,Hugues Roest Crollius +62 more
TL;DR: Genome analysis provides a greatly improved fish gene catalogue, including identifying key genes previously thought to be absent in fish, and reconstructs much of the evolutionary history of ancient and recent chromosome rearrangements leading to the modern human karyotype.
Journal ArticleDOI
The Phaeodactylum genome reveals the evolutionary history of diatom genomes
Chris Bowler,Andrew E. Allen,Andrew E. Allen,Jonathan H. Badger,Jane Grimwood,Kamel Jabbari,Alan Kuo,Uma Maheswari,Cindy Martens,Florian Maumus,Robert Otillar,Edda Rayko,Asaf Salamov,Klaas Vandepoele,Bank Beszteri,Ansgar Gruber,Marc Heijde,Michael Katinka,Thomas Mock,Klaus Valentin,Frédéric Verret,John A. Berges,Colin Brownlee,Jean-Paul Cadoret,Anthony Chiovitti,Chang Jae Choi,Sacha Coesel,Alessandra De Martino,J. Chris Detter,Colleen A. Durkin,Angela Falciatore,Jérome Fournet,Miyoshi Haruta,Marie J. J. Huysman,Bethany D. Jenkins,Katerina Jiroutova,Richard E. Jorgensen,Yolaine Joubert,Aaron Kaplan,Nils Kröger,Peter G. Kroth,Erica Lindquist,Markus Lommer,Véronique Martin-Jézéquel,Pascal J. Lopez,Susan Lucas,Manuela Mangogna,Karen M. McGinnis,Linda K. Medlin,Anton Montsant,Anton Montsant,Marie-Pierre Oudot-Le Secq,Carolyn A. Napoli,Miroslav Oborník,Micaela S. Parker,Jean-Louis Petit,Betina M. Porcel,Nicole Poulsen,Matthew Robison,Leszek Rychlewski,Tatiana A. Rynearson,Jeremy Schmutz,Jeremy Schmutz,Harris Shapiro,Magali Siaut,Michele S. Stanley,Michael R. Sussman,Alison Taylor,Assaf Vardi,Peter von Dassow,Wim Vyverman,Anusuya Willis,Lucyan S. Wyrwicz,Daniel S. Rokhsar,Jean Weissenbach,E. Virginia Armbrust,Beverley R. Green,Yves Van de Peer,Igor V. Grigoriev +78 more
TL;DR: Analysis of molecular divergence compared with yeasts and metazoans reveals rapid rates of gene diversification in diatoms, and documents the presence of hundreds of genes from bacteria, likely to provide novel possibilities for metabolite management and for perception of environmental signals.
Journal ArticleDOI
Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi
Michael Katinka,Simone Duprat,Emmanuel Cornillot,Guy Méténier,Fabienne Thomarat,Gérard Prensier,Valérie Barbe,Eric Peyretaillade,Philippe Brottier,Patrick Wincker,Frédéric Delbac,Hicham El Alaoui,Pierre Peyret,William Saurin,Manolo Gouy,Jean Weissenbach,Christian P. Vivarès +16 more
TL;DR: The DNA sequences of the 11 chromosomes of the ∼2.9-megabase (Mb) genome of Encephalitozoon cuniculi are reported and it is hypothesize that microsporidia have retained a mitochondrion-derived organelle.
Journal ArticleDOI
Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia
Jean-Marc Aury,Olivier Jaillon,Laurent Duret,Benjamin Noel,Claire Jubin,Betina M. Porcel,Béatrice Ségurens,Vincent Daubin,Véronique Anthouard,Nathalie Aiach,Olivier Arnaiz,Alain Billaut,Janine Beisson,Isabelle Blanc,Khaled Bouhouche,Francisco Câmara,Sandra Duharcourt,Roderic Guigó,Delphine Gogendeau,Michael Katinka,Anne-Marie Keller,Roland Kissmehl,Catherine Klotz,Anne Le Mouël,Gersende Lepère,Sophie Malinsky,Mariusz Nowacki,Jacek K. Nowak,Helmut Plattner,Julie Poulain,Françoise Ruiz,Vincent Serrano,Marek Zagulski,Philippe Dessen,Mireille Bétermier,Mireille Bétermier,Jean Weissenbach,Claude Scarpelli,Vincent Schächter,Linda Sperling,Eric Meyer,Jean Cohen,Patrick Wincker +42 more
TL;DR: It is shown that in the unicellular eukaryote Paramecium tetraurelia, a ciliate, most of the nearly 40,000 genes arose through at least three successive whole-genome duplications.
Global trends of whole-genome duplications revealed by the ciliate
Jean-Marc Auryl,Olivier Jaillon,Laurent Duree,Claire Jubin,Betina M. Porcel,Béatrice Segurens,Vincent Daubin,Véronique Anthouard,Nathalie Aiach,Olivier Arnaiz,Alain Billaue,Janine Beisson,Isabelle Blanc,Khaled Bouhouche,Francisco Camara,Sandra Duharcourt,Roderic Guigó,Delphine Gogendeau,Michael Katinka,Anne-Marie Keller,Roland Kissmehl,Catherine Klotz,Anne Le Mouël,Gersende Lepère,Sophie Malinsky,Mariusz Nowacki,Jacek K. Nowak,Helmut Plattner,Julie Poulain,Vincent Serrano,Marek Zagulski,Philippe Dessen,Mireille Bétermier,Jean Weissenbach,Claude Scarpelli,Vincent Schächter,Linda Sperling,Eric Meyer,Jean Cohen,Patrick Wincker +39 more
TL;DR: In the unicellular eukaryote Paramecium tetraurelia, a ciliate, most of the nearly 40,000 genes arose through at least three successive whole-genome duplications as mentioned in this paper.