Digital processing of speech signals

Audio signals generated by the human body (e.g., sighs, breathing, heart, digestion, vibration sounds) have routinely been used by clinicians as indicators to diagnose disease or assess disease progression. Until recently, such signals were usually collected through manual auscultation at scheduled visits. Research has now started to use digital technology to gather bodily sounds (e.g., from digital stethoscopes) for cardiovascular or respiratory examination, which could then be used for automatic analysis. Some initial work shows promise in detecting diagnostic signals of COVID-19 from voice and coughs. In this paper we describe our data analysis over a large-scale crowdsourced dataset of respiratory sounds collected to aid diagnosis of COVID-19. We use coughs and breathing to understand how discernible COVID-19 sounds are from those in asthma or healthy controls. Our results show that even a simple binary machine learning classifier is able to classify correctly healthy and COVID-19 sounds. We also show how we distinguish a user who tested positive for COVID-19 and has a cough from a healthy user with a cough, and users who tested positive for COVID-19 and have a cough from users with asthma and a cough. Our models achieve an AUC of above 80% across all tasks. These results are preliminary and only scratch the surface of the potential of this type of data and audio-based machine learning. This work opens the door to further investigation of how automatically analysed respiratory patterns could be used as pre-screening signals to aid COVID-19 diagnosis.

Exploring Automatic Diagnosis of COVID-19 from Crowdsourced Respiratory Sound Data

In December 2019, a novel virus named COVID-19 emerged in the city of Wuhan, China. In early 2020, the COVID-19 virus spread in all continents of the world except Antarctica, causing widespread infections and deaths due to its contagious characteristics and no medically proven treatment. The COVID-19 pandemic has been termed as the most consequential global crisis since the World Wars. The first line of defense against the COVID-19 spread are the non-pharmaceutical measures like social distancing and personal hygiene. The great pandemic affecting billions of lives economically and socially has motivated the scientific community to come up with solutions based on computer-aided digital technologies for diagnosis, prevention, and estimation of COVID-19. Some of these efforts focus on statistical and Artificial Intelligence-based analysis of the available data concerning COVID-19. All of these scientific efforts necessitate that the data brought to service for the analysis should be open source to promote the extension, validation, and collaboration of the work in the fight against the global pandemic. Our survey is motivated by the open source efforts that can be mainly categorized as (a) COVID-19 diagnosis from CT scans, X-ray images, and cough sounds, (b) COVID-19 case reporting, transmission estimation, and prognosis from epidemiological, demographic, and mobility data, (c) COVID-19 emotional and sentiment analysis from social media, and (d) knowledge-based discovery and semantic analysis from the collection of scholarly articles covering COVID-19. We survey and compare research works in these directions that are accompanied by open source data and code. Future research directions for data-driven COVID-19 research are also debated. We hope that the article will provide the scientific community with an initiative to start open source extensible and transparent research in the collective fight against the COVID-19 pandemic.

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COVID-19 open source data sets: a comprehensive survey

COVID-19 cough classification using machine learning and global smartphone recordings.

Research Interests Security and privacy: Active authentication, biometrics template protection, biometrics recognition. Computer vision: Domain adaptation, dictionary learning, object recognition, activity recognition, shape representation. Machine learning: Dimensionality reduction, clustering, kernel methods, weakly-supervised learning. Signal/Image processing: Sparse representation, compressive sampling, synthetic aperture radar imaging, millimeter wave imaging.

Sparse and redundant representations for inverse problems and recognition

The COVID-19 pandemic presents global challenges transcending boundaries of country, race, religion, and economy. The current gold standard method for COVID-19 detection is the reverse transcription polymerase chain reaction (RT-PCR) testing. However, this method is expensive, time-consuming, and violates social distancing. Also, as the pandemic is expected to stay for a while, there is a need for an alternate diagnosis tool which overcomes these limitations, and is deployable at a large scale. The prominent symptoms of COVID-19 include cough and breathing difficulties. We foresee that respiratory sounds, when analyzed using machine learning techniques, can provide useful insights, enabling the design of a diagnostic tool. Towards this, the paper presents an early effort in creating (and analyzing) a database, called Coswara, of respiratory sounds, namely, cough, breath, and voice. The sound samples are collected via worldwide crowdsourcing using a website application. The curated dataset is released as open access. As the pandemic is evolving, the data collection and analysis is a work in progress. We believe that insights from analysis of Coswara can be effective in enabling sound based technology solutions for point-of-care diagnosis of respiratory infection, and in the near future this can help to diagnose COVID-19. Â© 2020 ISCA

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Coswara - A database of breathing, cough, and voice sounds for COVID-19 diagnosis

The DiCOVA challenge aims at accelerating research in diagnosing COVID-19 using acoustics (DiCOVA), a topic at the intersection of speech and audio processing, respiratory health diagnosis, and machine learning. This challenge is an open call for researchers to analyze a dataset of sound recordings collected from COVID-19 infected and non-COVID-19 individuals for a two-class classification. These recordings were collected via crowdsourcing from multiple countries, through a website application. The challenge features two tracks, one focusing on cough sounds, and the other on using a collection of breath, sustained vowel phonation, and number counting speech recordings. In this paper, we introduce the challenge and provide a detailed description of the task, and present a baseline system for the task.

DiCOVA Challenge: Dataset, task, and baseline system for COVID-19 diagnosis using acoustics

Background
The objective of the study was to compare the efficacy of external fixation and volar plating on the functional parameter of displaced intra-articular (Cooney’s type IV) distal end radius fractures using the Green and O’Brien scoring system.

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External fixation versus volar locking plate for displaced intra-articular distal radius fractures: a prospective randomized comparative study of the functional outcomes

The Second Diagnosis of COVID-19 using Acoustics (DiCOVA) Challenge aimed at accelerating the research in acoustics based detection of COVID-19, a topic at the intersection of acoustics, signal processing, machine learning, and healthcare. This paper presents the details of the challenge, which was an open call for researchers to analyze a dataset of audio recordings consisting of breathing, cough and speech signals. This data was collected from individuals with and without COVID-19 infection, and the task in the challenge was a two-class classification. The development set audio recordings were collected from 965 (172 COVID-19 positive) individuals, while the evaluation set contained data from 471 individuals (71 COVID-19 positive). The challenge featured four tracks, one associated with each sound category of cough, speech and breathing, and a fourth fusion track. A baseline system was also released to benchmark the participants. In this paper, we present an overview of the challenge, the rationale for the data collection and the baseline system. Further, a performance analysis for the systems submitted by the 21 participating teams in the leaderboard is also presented.

Neeraj Sharma

Papers

Coswara - A database of breathing, cough, and voice sounds for COVID-19 diagnosis

DiCOVA Challenge: Dataset, task, and baseline system for COVID-19 diagnosis using acoustics

External fixation versus volar locking plate for displaced intra-articular distal radius fractures: a prospective randomized comparative study of the functional outcomes

DiCOVA Challenge: Dataset, task, and baseline system for COVID-19 diagnosis using acoustics

The Second Dicova Challenge: Dataset and Performance Analysis for Diagnosis of Covid-19 Using Acoustics