Nikos Mamoulis

Bio: Nikos Mamoulis is an academic researcher from University of Ioannina. The author has contributed to research in topics: Joins & Spatial query. The author has an hindex of 56, co-authored 282 publications receiving 11121 citations. Previous affiliations of Nikos Mamoulis include University of Hong Kong & Max Planck Society.

SPARTex: a vertex-centric framework for RDF data analytics

Abstract: A growing number of applications require combining SPARQL queries with generic graph search on RDF data. However, the lack of procedural capabilities in SPARQL makes it inappropriate for graph analytics. Moreover, RDF engines focus on SPARQL query evaluation whereas graph management frameworks perform only generic graph computations. In this work, we bridge the gap by introducing SPARTex, an RDF analytics framework based on the vertex-centric computation model. In SPARTex, user-defined vertex centric programs can be invoked from SPARQL as stored procedures. SPARTex allows the execution of a pipeline of graph algorithms without the need for multiple reads/writes of input data and intermediate results. We use a cost-based optimizer for minimizing the communication cost. SPARTex evaluates queries that combine SPARQL and generic graph computations orders of magnitude faster than existing RDF engines. We demonstrate a real system prototype of SPARTex running on a local cluster using real and synthetic datasets. SPARTex has a real-time graphical user interface that allows the participants to write regular SPARQL queries, use our proposed SPARQL extension to declaratively invoke graph algorithms or combine/pipeline both SPARQL querying and generic graph analytics.

Size-l object summaries for relational keyword search

Abstract: A previously proposed keyword search paradigm produces, as a query result, a ranked list of Object Summaries (OSs). An OS is a tree structure of related tuples that summarizes all data held in a relational database about a particular Data Subject (DS). However, some of these OSs are very large in size and therefore unfriendly to users that initially prefer synoptic information before proceeding to more comprehensive information about a particular DS. In this paper, we investigate the effective and efficient retrieval of concise and informative OSs. We argue that a good size-l OS should be a stand-alone and meaningful synopsis of the most important information about the particular DS. More precisely, we define a size-l OS as a partial OS composed of l important tuples. We propose three algorithms for the efficient generation of size-l OSs (in addition to the optimal approach which requires exponential time). Experimental evaluation on DBLP and TPC-H databases verifies the effectiveness and efficiency of our approach.

Approximate spatio-temporal retrieval

Abstract: This paper proposes a framework for the handling of spatio-temporal queries with inexact matches, using the concept of relation similarity. We initially describe a binary string encoding for 1D relations that permits the automatic derivation of similarity measures. We then extend this model to various granularity levels and many dimensions, and show that reasoning on spatio-temporal structure is significantly facilitated in the new framework. Finally, we provide algorithms and optimization methods for four types of queries: (i) object retrieval based on some spatio-temporal relations with respect to a reference object, (ii) spatial joins, i.e., retrieval of object pairs that satisfy some input relation, (iii) structural queries, which retrieve configurations matching a particular spatio-temporal structure, and (iv) special cases of motion queries. Considering the current large availability of multidimensional data and the increasing need for flexible query-answering mechanisms, our techniques can be used as the core of spatio-temporal query processors.

Efficient answering of set containment queries for skewed item distributions

Abstract: In this paper we address the problem of efficiently evaluating containment (i.e., subset, equality, and superset) queries over set-valued data. We propose a novel indexing scheme, the Ordered Inverted File (OIF) which, differently from the state-of-the-art, indexes set-valued attributes in an ordered fashion. We introduce query processing algorithms that practically treat containment queries as range queries over the ordered postings lists of OIF and exploit this ordering to quickly prune unnecessary page accesses. OIF is simple to implement and our experiments on both real and synthetic data show that it greatly outperforms the current state-of-the-art methods for all three classes of containment queries.

Activity-partner recommendation

Abstract: In many activities, such as watching movies or having dinner, people prefer to find partners before participation. Therefore, when recommending activity items (e.g., movie tickets) to users, it makes sense to also recommend suitable activity partners. This way, (i) the users save time for finding activity partners, (ii) the effectiveness of the item recommendation is increased (users may prefer activity items more if they can find suitable activity partners), (iii) recommender systems become more interesting and enkindle users’ social enthusiasm. In this paper, we identify the usefulness of suggesting activity partners together with items in recommender systems. In addition, we propose and compare several methods for activity-partner recommendation. Our study includes experiments that test the practical value of activity-partner recommendation and evaluate the effectiveness of all suggested methods as well as some alternative strategies.

“Bioinformatics” 특집을 내면서

Abstract: BIOE 402. Medical Technology Assessment. 2 or 3 hours. Bioentrepreneur course. Assessment of medical technology in the context of commercialization. Objectives, competition, market share, funding, pricing, manufacturing, growth, and intellectual property; many issues unique to biomedical products. Course Information: 2 undergraduate hours. 3 graduate hours. Prerequisite(s): Junior standing or above and consent of the instructor.

Data Mining: Concepts and Techniques (2nd edition)

Abstract: The book Knowledge Discovery in Databases, edited by Piatetsky-Shapiro and Frawley [PSF91], is an early collection of research papers on knowledge discovery from data. The book Advances in Knowledge Discovery and Data Mining, edited by Fayyad, Piatetsky-Shapiro, Smyth, and Uthurusamy [FPSSe96], is a collection of later research results on knowledge discovery and data mining. There have been many data mining books published in recent years, including Predictive Data Mining by Weiss and Indurkhya [WI98], Data Mining Solutions: Methods and Tools for Solving Real-World Problems by Westphal and Blaxton [WB98], Mastering Data Mining: The Art and Science of Customer Relationship Management by Berry and Linofi [BL99], Building Data Mining Applications for CRM by Berson, Smith, and Thearling [BST99], Data Mining: Practical Machine Learning Tools and Techniques by Witten and Frank [WF05], Principles of Data Mining (Adaptive Computation and Machine Learning) by Hand, Mannila, and Smyth [HMS01], The Elements of Statistical Learning by Hastie, Tibshirani, and Friedman [HTF01], Data Mining: Introductory and Advanced Topics by Dunham, and Data Mining: Multimedia, Soft Computing, and Bioinformatics by Mitra and Acharya [MA03]. There are also books containing collections of papers on particular aspects of knowledge discovery, such as Machine Learning and Data Mining: Methods and Applications edited by Michalski, Brakto, and Kubat [MBK98], and Relational Data Mining edited by Dzeroski and Lavrac [De01], as well as many tutorial notes on data mining in major database, data mining and machine learning conferences.

When is nearest neighbor meaningful

Abstract: We explore the effect of dimensionality on the nearest neighbor problem. We show that under a broad set of conditions (much broader than independent and identically distributed dimensions), as dimensionality increases, the distance to the nearest data point approaches the distance to the farthest data point. To provide a practical perspective, we present empirical results on both real and synthetic data sets that demonstrate that this effect can occur for as few as 10-15 dimensions. These results should not be interpreted to mean that high-dimensional indexing is never meaningful; we illustrate this point by identifying some high-dimensional workloads for which this effect does not occur. However, our results do emphasize that the methodology used almost universally in the database literature to evaluate high-dimensional indexing techniques is flawed, and should be modified. In particular, most such techniques proposed in the literature are not evaluated versus simple linear scan, and are evaluated over workloads for which nearest neighbor is not meaningful. Often, even the reported experiments, when analyzed carefully, show that linear scan would outperform the techniques being proposed on the workloads studied in high (10-15) dimensionality!.