Nir Sochen

Bio: Nir Sochen is an academic researcher from Tel Aviv University. The author has contributed to research in topics: Image segmentation & Image processing. The author has an hindex of 40, co-authored 213 publications receiving 7085 citations. Previous affiliations of Nir Sochen include Technion – Israel Institute of Technology & French Alternative Energies and Atomic Energy Commission.

Free water elimination and mapping from diffusion MRI.

Abstract: Relating brain tissue properties to diffusion tensor imaging (DTI) is limited when an image voxel contains partial volume of brain tissue with free water, such as cerebrospinal fluid or edema, rendering the DTI indices no longer useful for describing the underlying tissue properties. We propose here a method for separating diffusion properties of brain tissue from surrounding free water while mapping the free water volume. This is achieved by fitting a bi-tensor model for which a mathematical framework is introduced to stabilize the fitting. Applying the method on datasets from a healthy subject and a patient with edema yielded corrected DTI indices and a more complete tract reconstruction that passed next to the ventricles and through the edema. We were able to segment the edema into areas according to the condition of the underlying tissue. In addition, the volume of free water is suggested as a new quantitative contrast of diffusion MRI. The findings suggest that free water is not limited to the borders of the brain parenchyma; it therefore contributes to the architecture surrounding neuronal bundles and may indicate specific anatomical processes. The analysis requires a conventional DTI acquisition and can be easily merged with existing DTI pipelines.

A general framework for low level vision

Abstract: We introduce a new geometrical framework based on which natural flows for image scale space and enhancement are presented. We consider intensity images as surfaces in the (x,I) space. The image is, thereby, a two-dimensional (2-D) surface in three-dimensional (3-D) space for gray-level images, and 2-D surfaces in five dimensions for color images. The new formulation unifies many classical schemes and algorithms via a simple scaling of the intensity contrast, and results in new and efficient schemes. Extensions to multidimensional signals become natural and lead to powerful denoising and scale space algorithms.

Image enhancement and denoising by complex diffusion processes

Abstract: The linear and nonlinear scale spaces, generated by the inherently real-valued diffusion equation, are generalized to complex diffusion processes, by incorporating the free Schrodinger equation. A fundamental solution for the linear case of the complex diffusion equation is developed. Analysis of its behavior shows that the generalized diffusion process combines properties of both forward and inverse diffusion. We prove that the imaginary part is a smoothed second derivative, scaled by time, when the complex diffusion coefficient approaches the real axis. Based on this observation, we develop two examples of nonlinear complex processes, useful in image processing: a regularized shock filter for image enhancement and a ramp preserving denoising process.

Forward-and-backward diffusion processes for adaptive image enhancement and denoising

Abstract: Signal and image enhancement is considered in the context of a new type of diffusion process that simultaneously enhances, sharpens, and denoises images. The nonlinear diffusion coefficient is locally adjusted according to image features such as edges, textures, and moments. As such, it can switch the diffusion process from a forward to a backward (inverse) mode according to a given set of criteria. This results in a forward-and-backward (FAB) adaptive diffusion process that enhances features while locally denoising smoother segments of the signal or image. The proposed method, using the FAB process, is applied in a super-resolution scheme. The FAB method is further generalized for color processing via the Beltrami flow, by adaptively modifying the structure tensor that controls the nonlinear diffusion process. The proposed structure tensor is neither positive definite nor negative, and switches between these states according to image features. This results in a forward-and-backward diffusion flow where different regions of the image are either forward or backward diffused according to the local geometry within a neighborhood.

Images as Embedded Maps and Minimal Surfaces: Movies, Color, Texture, and Volumetric Medical Images

Abstract: We extend the geometric framework introduced in Sochen et al. (IEEE Trans. on Image Processing, 7(3):310–318, 1998) for image enhancement. We analyze and propose enhancement techniques that selectively smooth images while preserving either the multi-channel edges or the orientation-dependent texture features in them. Images are treated as manifolds in a feature-space. This geometrical interpretation lead to a general way for grey level, color, movies, volumetric medical data, and color-texture image enhancement. We first review our framework in which the Polyakov action from high-energy physics is used to develop a minimization procedure through a geometric flow for images. Here we show that the geometric flow, based on manifold volume minimization, yields a novel enhancement procedure for color images. We apply the geometric framework and the general Beltrami flow to feature-preserving denoising of images in various spaces. Next, we introduce a new method for color and texture enhancement. Motivated by Gabor's geometric image sharpening method (Gabor, Laboratory Investigation, 14(6):801–807, 1965), we present a geometric sharpening procedure for color images with texture. It is based on inverse diffusion across the multi-channel edge, and diffusion along the edge.

Principles of Neural Science

Abstract: I have developed "tennis elbow" from lugging this book around the past four weeks, but it is worth the pain, the effort, and the aspirin. It is also worth the (relatively speaking) bargain price. Including appendixes, this book contains 894 pages of text. The entire panorama of the neural sciences is surveyed and examined, and it is comprehensive in its scope, from genomes to social behaviors. The editors explicitly state that the book is designed as "an introductory text for students of biology, behavior, and medicine," but it is hard to imagine any audience, interested in any fragment of neuroscience at any level of sophistication, that would not enjoy this book. The editors have done a masterful job of weaving together the biologic, the behavioral, and the clinical sciences into a single tapestry in which everyone from the molecular biologist to the practicing psychiatrist can find and appreciate his or

Stochastic Processes in Physics and Chemistry

Abstract: N G van Kampen 1981 Amsterdam: North-Holland xiv + 419 pp price Dfl 180 This is a book which, at a lower price, could be expected to become an essential part of the library of every physical scientist concerned with problems involving fluctuations and stochastic processes, as well as those who just enjoy a beautifully written book. It provides an extensive graduate-level introduction which is clear, cautious, interesting and readable.

Computer vision : a modern approach = 计算机视觉 : 一种现代的方法

Abstract: From the Publisher: The accessible presentation of this book gives both a general view of the entire computer vision enterprise and also offers sufficient detail to be able to build useful applications. Users learn techniques that have proven to be useful by first-hand experience and a wide range of mathematical methods. A CD-ROM with every copy of the text contains source code for programming practice, color images, and illustrative movies. Comprehensive and up-to-date, this book includes essential topics that either reflect practical significance or are of theoretical importance. Topics are discussed in substantial and increasing depth. Application surveys describe numerous important application areas such as image based rendering and digital libraries. Many important algorithms broken down and illustrated in pseudo code. Appropriate for use by engineers as a comprehensive reference to the computer vision enterprise.

Anisotropic diffusion in image processing

Abstract: Preface Through many centuries physics has been one of the most fruitful sources of inspiration for mathematics. As a consequence, mathematics has become an economic language providing a few basic principles which allow to explain a large variety of physical phenomena. Many of them are described in terms of partial diierential equations (PDEs). In recent years, however, mathematics also has been stimulated by other novel elds such as image processing. Goals like image segmentation, multiscale image representation, or image restoration cause a lot of challenging mathematical questions. Nevertheless, these problems frequently have been tackled with a pool of heuristical recipes. Since the treatment of digital images requires very much computing power, these methods had to be fairly simple. With the tremendous advances in computer technology in the last decade, it has become possible to apply more sophisticated techniques such as PDE-based methods which have been inspired by physical processes. Among these techniques, parabolic PDEs have found a lot of attention for smoothing and restoration purposes, see e.g. 113]. To restore images these equations frequently arise from gradient descent methods applied to variational problems. Image smoothing by parabolic PDEs is closely related to the scale-space concept where one embeds the original image into a family of subsequently simpler , more global representations of it. This idea plays a fundamental role for extracting semantically important information. The pioneering work of Alvarez, Guichard, Lions and Morel 11] has demonstrated that all scale-spaces fulllling a few fairly natural axioms are governed by parabolic PDEs with the original image as initial condition. Within this framework, two classes can be justiied in a rigorous way as scale-spaces: the linear diiusion equation with constant dif-fusivity and nonlinear so-called morphological PDEs. All these methods satisfy a monotony axiom as smoothing requirement which states that, if one image is brighter than another, then this order is preserved during the entire scale-space evolution. An interesting class of parabolic equations which pursue both scale-space and restoration intentions is given by nonlinear diiusion lters. Methods of this type have been proposed for the rst time by Perona and Malik in 1987 190]. In v vi PREFACE order to smooth the image and to simultaneously enhance semantically important features such as edges, they apply a diiusion process whose diiusivity is steered by local image properties. These lters are diicult to analyse mathematically , as they may act locally like a backward diiusion process. …