Nitin Chattopadhyay

Bio: Nitin Chattopadhyay is an academic researcher from Jadavpur University. The author has contributed to research in topics: Excited state & Fluorescence anisotropy. The author has an hindex of 36, co-authored 155 publications receiving 4587 citations. Previous affiliations of Nitin Chattopadhyay include University of Coimbra & Jalpaiguri Government Engineering College.

Spectroscopic investigation on the interaction of ICT probe 3-acetyl-4-oxo-6,7-dihydro-12H Indolo-[2,3-a] quinolizine with serum albumins.

Abstract: Interaction of 3-acetyl-4-oxo-6,7-dihydro-12H indolo-[2,3-a] quinolizine (AODIQ), a biologically active molecule, with model transport proteins, bovine serum albumin (BSA) and human serum albumin (HSA) have been studied using steady state and picosecond time-resolved fluorescence and fluorescence anisotropy. The polarity dependent intramolecular charge transfer (ICT) process is responsible for the remarkable sensitivity of this biological fluorophore to the protein environments. The CT fluorescence exhibits appreciable hypsochromic shift along with an enhancement in the fluorescence yield, fluorescence anisotropy (r) and fluorescence lifetime upon binding with the proteins. The reduction in the rate of ICT within the hydrophobic interior of albumins leads to an increase in the fluorescence yield and lifetime. Marked increase in the fluorescence anisotropy indicates that the probe molecule is located in a motionally constrained environment within the proteins. Micropolarities in the two proteinous environments have been determined following the polarity sensitivity of the CT emission. Addition of urea to the protein-bound systems leads to a reduction in the fluorescence anisotropy indicating the denaturation of the proteins. Polarity measurements and fluorescence resonance energy transfer (FRET) studies throw light in assessing the location of the fluorophore within the two proteinous media.

Binding interaction of cationic phenazinium dyes with calf thymus DNA: a comparative study.

Abstract: Absorption, steady-state fluorescence, steady-state fluorescence anisotropy, and intrinsic and induced circular dichroism (CD) have been exploited to explore the binding of calf thymus DNA (ctDNA) with three cationic phenazinium dyes, viz., phenosafranin (PSF), safranin-T (ST), and safranin-O (SO). The absorption and fluorescence spectra of all the three dyes reflect significant modifications upon interaction with the DNA. A comparative study of the dyes with respect to modification of fluorescence and fluorescence anisotropy upon binding, effect of urea, iodide-induced fluorescence quenching, and CD measurements reveal that the dyes bind to the ctDNA principally in an intercalative fashion. The effect of ionic strength indicates that electrostatic attraction between the cationic dyes and ctDNA is also an important component of the dye-DNA interaction. Intrinsic and induced CD studies help to assess the structural effects of dyes binding to DNA and confirm the intercalative mode of binding as suggested by fluorescence and other studies. Finally it is proposed that dyes with bulkier substitutions are intercalated into the DNA to a lesser extent.

Spectroscopic Exploration of Mode of Binding of ctDNA with 3-Hydroxyflavone: A Contrast to the Mode of Binding with Flavonoids Having Additional Hydroxyl Groups

Abstract: Binding interaction of 3-hydroxyflavone (3HF), a bioactive flavonoid, with calf-thymus DNA (ctDNA) has been explored exploiting various experimental techniques. The dual fluorescence of 3HF resulting from the excited state intramolecular proton transfer (ESIPT) is modified remarkably upon binding with the biomacromolecule. The determined binding constant, fluorescence quenching experiment, circular dichroism (CD) study, comparative binding study with the known intercalative binder ethidium bromide and thermometric experiment relating to the helix melting of ctDNA confirm the groove binding of 3HF with the DNA. This is in contrast to two other members of the flavonoid group, namely, fisetin and quercetin, where the bindings are established to be intercalative. The structural difference of 3HF from the other two probes with respect to the absence/presence of the additional hydroxyl groups is ascribed to be responsible for the difference in the mode of binding.

Principles Of Fluorescence Spectroscopy

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Structural Changes Accompanying Intramolecular Electron Transfer: Focus on Twisted Intramolecular Charge-Transfer States and Structures

Abstract: 6. Rehybridization of the Acceptor (RICT) 3908 7. Planarization of the Molecule (PICT) 3909 III. Fluorescence Spectroscopy 3909 A. Solvent Effects and the Model Compounds 3909 1. Solvent Effects on the Spectra 3909 2. Steric Effects and Model Compounds 3911 3. Bandwidths 3913 4. Isoemissive Points 3914 B. Dipole Moments 3915 C. Radiative Rates and Transition Moments 3916 1. Quantum Yields and Radiationless Deactivation Processes 3916

Fluoro- and Chromogenic Chemodosimeters for Heavy Metal Ion Detection in Solution and Biospecimens

Abstract: Heavy metal ions are of great concern, not only among the scientific community, especially chemists, biologists, and environmentalists, but increasingly among the general population, who are aware of the some of the disadvantages associated with them. In spite of the fact that some heavy metal ions play important roles in living systems, they are very toxic and hence capable of causing serious environmental and health problems.1-6 Some heavy metal ions, such as Fe(III), Zn(II), Cu(II), Co(II), Mn(II), and Mo(VI), are essential for the maintenance of human metabolism. However, high concentrations of these ions can lead to many adverse health effects.1,2,7-20 It is also a fact that others such as Hg(II), Cd(II), Pb(II), and As(III) are among the most toxic ions known that lack any vital or beneficial effects. Accumulation of these over time in the bodies of humans and animals can lead to serious debilitating illnesses.2,21-30 Therefore, the development of increasingly selective and sensitive methods for the determination of heavy metal ions is currently receiving considerable attention.7,23,31-36 Several methods, including atomic absorption spectroscopy, inductively coupled plasma atomic emission spectrometry, electrochemical sensoring, and the use of piezoelectric quartz crystals make it possible to detect low limits.37-40 However, these methods require expensive equipment and involve time-consuming and laborious procedures that can be carried out only by trained professionals. Alternatively, analytical techniques based on fluorescence detection are very popular because fluorescence measurements are usually very sensitive (parts per billion/trillion), easy to perform, and inexpensive.23,37,41-45 Furthermore, the photophysical properties of a fluorophore can be easily tuned using a range of routes: charge transfer, electron transfer, energy transfer, the influence of the heavy metal ions, and the destabilization of nonemissive n-π* excited states.5 Consequently, a large number of papers involving fluorescent chemosensors (see definition in section 2) have been published. In general to date, fluorescent chemosensors for anions and cations have proven popular, but those for many heavy metal ions such as Hg(II), Pb(II), Cu(II), Fe(III), and Ag(I) present challenges because these ions often act as fluorescence quenchers. Cu(II) is a typical ion that causes the chemosensor to decrease fluorescent emissions due to quenching of the fluorescence by mechanisms inherent to the paramagnetic species.46-48 Such decreased emissions are impractical for analytical purposes because of their low signal outputs upon complexation. In addition, temporal separation of spectrally similar complexes by time-resolved fluorimetry is subsequently prevented.49 Compared to the relatively well-developed fluorescent chemosensors, fluorescent chemodosimeters (see definition in section 2) have recently emerged as a research area of * Corresponding author. E-mail: jongskim@korea.ac.kr. † Hue University. ‡ Korea University. Duong Tuan Quang was born in 1970 in Thanhhoa, Vietnam, and graduated from Hue University in 1992, where he obtained his M.S. degree two years later and began his career as a lecturer in Chemistry soon afterwards. He received his Ph.D. degree in 2003 from Institute of Chemistry, Vietnamese Academy of Science and Technology. In 2006, he worked as a postdoctoral fellow in Professor Jong Seung Kim’s laboratory, Dankook University, Seoul, Korea. He was promoted as an associate professor in 2009 and went to Korea University as a research professor in 2010. His main task involved the development of chromogenic and fluorogenic molecular sensors to detect specific cations and anions. Chem. Rev. 2010, 110, 6280–6301 6280

MOFs, MILs and more: concepts, properties and applications for porous coordination networks (PCNs)

Abstract: This review (over 380 references) summarizes metal–organic frameworks (MOFs), Materials Institute Lavoisier (MILs), iso-reticular metal–organic frameworks (IR-MOFs), porous coordination networks (PCNs), zeolitic metal–organic frameworks (ZMOFs) and porous coordination polymers (PCPs) with selected examples of their structures, concepts for linkers, syntheses, post-synthesis modifications, metal nanoparticle formations in MOFs, porosity and zeolitic behavior for applications in gas storage for hydrogen, carbon dioxide, methane and applications in conductivity, luminescence and catalysis.