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Pauline C. Ng
Researcher at J. Craig Venter Institute
Publications - 9
Citations - 4040
Pauline C. Ng is an academic researcher from J. Craig Venter Institute. The author has contributed to research in topics: Reference genome & Human genome. The author has an hindex of 9, co-authored 9 publications receiving 3853 citations. Previous affiliations of Pauline C. Ng include Genome Institute of Singapore & Illumina.
Papers
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Journal ArticleDOI
The Diploid Genome Sequence of an Individual Human
Samuel Levy,Granger G. Sutton,Pauline C. Ng,Lars Feuk,Aaron L. Halpern,Brian P. Walenz,Nelson Axelrod,Jiaqi Huang,Ewen F. Kirkness,Gennady Denisov,Yuan Lin,Jeffrey R. MacDonald,Andy Wing Chun Pang,Mary Shago,Timothy B. Stockwell,Alexia Tsiamouri,Vineet Bafna,Vikas Bansal,Saul A. Kravitz,Dana A. Busam,Karen Beeson,Tina C McIntosh,Karin A. Remington,Josep F. Abril,John Gill,Jon Borman,Yu-Hui Rogers,Marvin Frazier,Stephen W. Scherer,Robert L. Strausberg,J. Craig Venter +30 more
TL;DR: A modified version of the Celera assembler is developed to facilitate the identification and comparison of alternate alleles within this individual diploid genome, and a novel haplotype assembly strategy is used, able to span 1.5 Gb of genome sequence in segments >200 kb, providing further precision to the diploids nature of the genome.
Journal ArticleDOI
Evaluation of next generation sequencing platforms for population targeted sequencing studies
Olivier Harismendy,Pauline C. Ng,Robert L. Strausberg,Xiaoyun Wang,Timothy B. Stockwell,Karen Beeson,Nicholas J. Schork,Sarah S. Murray,Eric J. Topol,Samuel Levy,Kelly A. Frazer +10 more
TL;DR: This study analyzed human sequence generated by the Roche 454, Illumina GA, and the ABI SOLiD technologies for the same 260 kb in four individuals to provide important insights into systematic biases and data variability that need to be considered when utilizing NGS platforms for population targeted sequencing studies.
Book ChapterDOI
Whole genome sequencing.
Pauline C. Ng,Ewen F. Kirkness +1 more
TL;DR: There are two approaches for assembling short shotgun sequence reads into longer contiguous genomic sequences: reference-based and de novo assembly as mentioned in this paper, where sequence reads are compared to each other, and then overlapped to build longer contiguous sequences.
Journal ArticleDOI
An agenda for personalized medicine
TL;DR: Differences in results from two direct-toconsumer genetics-testing companies are found and nine recommendations to improve predictions are given.
Journal ArticleDOI
Genetic variation in an individual human exome.
Pauline C. Ng,Samuel Levy,Jiaqi Huang,Timothy B. Stockwell,Brian P. Walenz,Kelvin Li,Nelson Axelrod,Dana A. Busam,Robert L. Strausberg,J. Craig Venter +9 more
TL;DR: This is the first glimpse of an individual's exome and a snapshot of the current state of personalized genomics, and presents an approach to analyze the coding variation in humans by proposing multiple bioinformatic methods to hone in on possible functional variation.