P
Peter Bankhead
Researcher at University of Edinburgh
Publications - 62
Citations - 7191
Peter Bankhead is an academic researcher from University of Edinburgh. The author has contributed to research in topics: Computer science & Colorectal cancer. The author has an hindex of 23, co-authored 53 publications receiving 3293 citations. Previous affiliations of Peter Bankhead include Queen's University Belfast & Western General Hospital.
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Journal ArticleDOI
QuPath: Open source software for digital pathology image analysis
Peter Bankhead,Maurice B Loughrey,Maurice B Loughrey,José A Fernández,Yvonne Dombrowski,Darragh G. McArt,Philip D Dunne,Stephen McQuaid,Stephen McQuaid,Ronan T. Gray,Liam J. Murray,Helen G. Coleman,Jacqueline A James,Jacqueline A James,Manuel Salto-Tellez,Manuel Salto-Tellez,Peter W. Hamilton +16 more
TL;DR: QuPath provides researchers with powerful batch-processing and scripting functionality, and an extensible platform with which to develop and share new algorithms to analyze complex tissue images, making it suitable for a wide range of additional image analysis applications across biomedical research.
Posted ContentDOI
QuPath: Open source software for digital pathology image analysis
Peter Bankhead,Maurice B Loughrey,José A Fernández,Yvonne Dombrowski,Darragh G. McArt,Philip D Dunne,Stephen McQuaid,Ronan T. Gray,Liam J. Murray,Helen G. Coleman,Jacqueline A James,Manuel Salto-Tellez,Peter W. Hamilton +12 more
TL;DR: QuPath provides researchers with powerful batch-processing and scripting functionality, and an extensible platform with which to develop and share new algorithms to analyze complex tissue images, making it suitable for a wide range of additional image analysis applications across biomedical research.
Journal ArticleDOI
Fast Retinal Vessel Detection and Measurement Using Wavelets and Edge Location Refinement
TL;DR: A novel algorithm for the efficient detection and measurement of retinal vessels, which is general enough that it can be applied to both low and high resolution fundus photographs and fluorescein angiograms upon the adjustment of only a few intuitive parameters is presented.
Journal ArticleDOI
Pan-cancer image-based detection of clinically actionable genetic alterations
Jakob Nikolas Kather,Jakob Nikolas Kather,Lara R. Heij,Lara R. Heij,Heike I. Grabsch,Heike I. Grabsch,Chiara Loeffler,Amelie Echle,Hannah Sophie Muti,Jeremias Krause,Jan M. Niehues,Kai A. J. Sommer,Peter Bankhead,Loes F. S. Kooreman,Jefree J. Schulte,Nicole A. Cipriani,Roman D. Buelow,Peter Boor,Nadina Ortiz-Brüchle,Andrew M. Hanby,Valerie Speirs,Sara Kochanny,Akash Patnaik,Andrew Srisuwananukorn,Hermann Brenner,Michael Hoffmeister,Piet A. van den Brandt,Dirk Jäger,Christian Trautwein,Alexander T. Pearson,Tom Luedde +30 more
TL;DR: The findings show that a single deep learning algorithm can be trained to predict a wide range of molecular alterations from routine, paraffin-embedded histology slides stained with hematoxylin and eosin.
Journal ArticleDOI
Regulatory T cells promote myelin regeneration in the central nervous system.
Yvonne Dombrowski,Thomas O'Hagan,Marie Dittmer,Rosana Penalva,Sonia R. Mayoral,Peter Bankhead,Samara Fleville,Georgios Eleftheriadis,Chao Zhao,Michelle Naughton,Rachel Hassan,Jill Moffat,John Falconer,Amanda Boyd,Peter W. Hamilton,Ingrid V. Allen,Adrien Kissenpfennig,Paul N. Moynagh,Emma Evergren,Bernard Perbal,Anna Williams,Rebecca J. Ingram,Jonah R. Chan,Robin J.M. Franklin,Denise C. Fitzgerald +24 more
TL;DR: Findings reveal a new regenerative function of Treg in the CNS, distinct from immunomodulation, and identify CCN3 as a Treg-derived mediator of oligodendrocyte differentiation and myelination in vitro.