Preface to the Princeton Landmarks in Biology Edition vii Preface xi Symbols Used xiii 1. The Importance of Islands 3 2. Area and Number of Speicies 8 3. Further Explanations of the Area-Diversity Pattern 19 4. The Strategy of Colonization 68 5. Invasibility and the Variable Niche 94 6. Stepping Stones and Biotic Exchange 123 7. Evolutionary Changes Following Colonization 145 8. Prospect 181 Glossary 185 References 193 Index 201

The Theory of Island Biogeography

Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

How should ecologists and evolutionary biologists analyze nonnormal data that involve random effects? Nonnormal data such as counts or proportions often defy classical statistical procedures. Generalized linear mixed models (GLMMs) provide a more flexible approach for analyzing nonnormal data when random effects are present. The explosion of research on GLMMs in the last decade has generated considerable uncertainty for practitioners in ecology and evolution. Despite the availability of accurate techniques for estimating GLMM parameters in simple cases, complex GLMMs are challenging to fit and statistical inference such as hypothesis testing remains difficult. We review the use (and misuse) of GLMMs in ecology and evolution, discuss estimation and inference and summarize 'best-practice' data analysis procedures for scientists facing this challenge.

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Generalized linear mixed models: a practical guide for ecology and evolution

Humans are altering the composition of biological communities through a variety of activities that increase rates of species invasions and species extinctions, at all scales, from local to global. These changes in components of the Earth's biodiversity cause concern for ethical and aesthetic reasons, but they also have a strong potential to alter ecosystem properties and the goods and services they provide to humanity. Ecological experiments, observations, and theoretical developments show that ecosystem properties depend greatly on biodiversity in terms of the functional characteristics of organisms present in the ecosystem and the distribution and abundance of those organisms over space and time. Species effects act in concert with the effects of climate, resource availability, and disturbance regimes in influencing ecosystem properties. Human activities can modify all of the above factors; here we focus on modification of these biotic controls. The scientific community has come to a broad consensus on many aspects of the re- lationship between biodiversity and ecosystem functioning, including many points relevant to management of ecosystems. Further progress will require integration of knowledge about biotic and abiotic controls on ecosystem properties, how ecological communities are struc- tured, and the forces driving species extinctions and invasions. To strengthen links to policy and management, we also need to integrate our ecological knowledge with understanding of the social and economic constraints of potential management practices. Understanding this complexity, while taking strong steps to minimize current losses of species, is necessary for responsible management of Earth's ecosystems and the diverse biota they contain.

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Effects of biodiversity on ecosystem functioning: a consensus of current knowledge

https://www.wsl.ch/staff/niklaus.zimmermann/papers/ecomod135_147.pdf

Predictive habitat distribution models in ecology

▪ Abstract The focus of most ideas on diversity maintenance is species coexistence, which may be stable or unstable. Stable coexistence can be quantified by the long-term rates at which community members recover from low density. Quantification shows that coexistence mechanisms function in two major ways: They may be (a) equalizing because they tend to minimize average fitness differences between species, or (b) stabilizing because they tend to increase negative intraspecific interactions relative to negative interspecific interactions. Stabilizing mechanisms are essential for species coexistence and include traditional mechanisms such as resource partitioning and frequency-dependent predation, as well as mechanisms that depend on fluctuations in population densities and environmental factors in space and time. Equalizing mechanisms contribute to stable coexistence because they reduce large average fitness inequalities which might negate the effects of stabilizing mechanisms. Models of unstable coexitence...

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Mechanisms of Maintenance of Species Diversity

Community ecology theory can be used to understand biological invasions by applying recent niche concepts to alien species and the communities that they invade. These ideas lead to the concept of ‘niche opportunity', which defines conditions that promote invasions in terms of resources, natural enemies, the physical environment, interactions between these factors, and the manner in which they vary in time and space. Niche opportunities vary naturally between communities but might be greatly increased by disruption of communities, especially if the original community members are less well adapted to the new conditions. Recent niche theory clarifies the prediction that low niche opportunities (invasion resistance) result from high species diversity. Conflicting empirical patterns of invasion resistance are potentially explained by covarying external factors. These various ideas derived from community ecology provide a predictive framework for invasion ecology.

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Community ecology theory as a framework for biological invasions

In deterministic approaches to modeling, two species are generally regarded as capable of coexistence if the model has a stable equilibrium with both species in positive numbers. Temporal environmental variability is assumed to reduce the likelihood of coexistence by keeping species abundances away from equilibrium. Here we present a contrasting view based on a model of competition for space among coral reef fishes, or any similarly territorial animals. The model has no stable equilibrium point with both species in positive abundance, yet both species persist in the system provided environmental variability in birth rates is sufficiently high. In general the higher the environmental variability the more likely it is that coexistence will occur. This conclusion is not affected by one species having a mean advantage over the other. Not all kinds of environmental variability necessarily lead to coexistence, however, for when the death rates of the two species are highly variable and negatively correlated, th...

Environmental Variability Promotes Coexistence in Lottery Competitive Systems

http://eebweb.arizona.edu/Faculty/chesson/Peter/Reprints/2000_General_Theory.pdf

General Theory of Competitive Coexistence in Spatially-Varying Environments

Harsh conditions (e.g., mortality and stress) reduce population growth rates directly; secondarily, they may reduce the intensity of interactions between organisms. Near‐exclusive focus on...

/pdf/the-roles-of-harsh-and-fluctuating-conditions-in-the-4uaji8t81q.pdf

Peter Chesson

Papers

Mechanisms of Maintenance of Species Diversity

Community ecology theory as a framework for biological invasions

Environmental Variability Promotes Coexistence in Lottery Competitive Systems

General Theory of Competitive Coexistence in Spatially-Varying Environments

The Roles of Harsh and Fluctuating Conditions in the Dynamics of Ecological Communities