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R. David Hawkins

Researcher at University of Washington

Publications -  61
Citations -  25698

R. David Hawkins is an academic researcher from University of Washington. The author has contributed to research in topics: Epigenomics & DNA methylation. The author has an hindex of 32, co-authored 57 publications receiving 22872 citations. Previous affiliations of R. David Hawkins include Ludwig Institute for Cancer Research & Åbo Akademi University.

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Integrative analysis of 111 reference human epigenomes

Anshul Kundaje, +123 more
- 19 Feb 2015 - 
TL;DR: It is shown that disease- and trait-associated genetic variants are enriched in tissue-specific epigenomic marks, revealing biologically relevant cell types for diverse human traits, and providing a resource for interpreting the molecular basis of human disease.
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Human DNA methylomes at base resolution show widespread epigenomic differences

TL;DR: The first genome-wide, single-base-resolution maps of methylated cytosines in a mammalian genome, from both human embryonic stem cells and fetal fibroblasts, along with comparative analysis of messenger RNA and small RNA components of the transcriptome, several histone modifications, and sites of DNA-protein interaction for several key regulatory factors were presented in this article.
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Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome.

TL;DR: Insight is given into the connections between chromatin modifications and transcriptional regulatory activity and a novel functional enhancer for the carnitine transporter SLC22A5 (OCTN2) is uncovered, providing a new tool for the functional annotation of the human genome.
Journal Article

Histone Modifications at Human Enhancers Reflect Global Cell-Type-Specific Gene Expression

TL;DR: In this article, a chromatin-immunoprecipitation-based microarray method (ChIP-chip) was used to locate promoters, enhancers and insulators in the human genome and investigate their roles in cell-type specific gene expression.