Raghunathan Rengaswamy

Bio: Raghunathan Rengaswamy is an academic researcher from Indian Institute of Technology Madras. The author has contributed to research in topics: Proton exchange membrane fuel cell & Fault detection and isolation. The author has an hindex of 39, co-authored 210 publications receiving 9632 citations. Previous affiliations of Raghunathan Rengaswamy include Indian Institute of Technology Bombay & Bosch.

Metabolic modeling of host–microbe interactions for therapeutics in colorectal cancer

Abstract: Abstract The onset of colorectal cancer (CRC) is often attributed to gut bacterial dysbiosis, and thus gut microbiota are highly relevant in devising treatment strategies. Certain gut microbes, like Enterococcus spp ., exhibit remarkable anti-neoplastic and probiotic properties, which can aid in silver nanoparticle (AgNPs) induced reactive oxygen species (ROS)-based CRC treatment. However, the effects of AgNPs on gut microbial metabolism have not been reported thus far. In this study, a detailed systems-level understanding of ROS metabolism in Enterococcus durans ( E. durans ), a representative gut microbe, was gained using constraint-based modeling, wherein, the critical association between ROS and folate metabolism was established. Experimental studies involving low AgNP concentration treatment of E. durans cultures confirmed these modeling predictions (an increased extracellular folate concentration by 52%, at the 9 th h of microbial growth, was observed). Besides, the computational studies established various metabolic pathways involving amino acids, energy metabolites, nucleotides, and SCFAs as the key players in elevating folate levels on ROS exposure. The anti-cancer potential of E. durans was also studied through MTT analysis of HCT 116 cells treated with microbial culture (AgNP treated) supernatant. A decrease in cell viability by 19% implicated the role of microbial metabolites (primarily folate) in causing cell death. The genome-scale modeling approach was then extended to extensively model CRC metabolism, as well as CRC– E. durans interactions in the context of CRC treatment, using tissue-specific metabolic models of CRC and healthy colon. These findings on further validation can facilitate the development of robust and effective cancer therapy.

Achieving resilience in critical infrastructures: A case study for a nuclear power plant cooling loop

Abstract: Engineered systems are increasingly equipped with sensing and actuating equipment making the operation ans supervisory task increasingly difficult to handle by means of human interaction alone. In particular, the detection, identification and accommodation of abnormal, potentially harmful, events has been a long-standing challenge. Many scientists in different scientific areas have attacked this problem which has resulted in a plethora of techniques for both Fault Detection and Identification (FDI) and advanced control, each with their strengths and weaknesses. Because of the diverse nature of adopted theory and paradigms and because of a historical separation of FDI specialists and control theoreticians, it remains a challenge to establish automated systems able to handle exceptional events with minimal human intervention. As such, a project has been set up to enable full integration of diverse FDI methods as well as optimal coupling of FDI modules and control modules in the closed-loop supervisory control system. In this contribution, we introduce the basic paradigms of our approach, a strategic plan to achieve this goal as well as some preliminary results.

I and i

Abstract: There is, I think, something ethereal about i —the square root of minus one. I remember first hearing about it at school. It seemed an odd beast at that time—an intruder hovering on the edge of reality. Usually familiarity dulls this sense of the bizarre, but in the case of i it was the reverse: over the years the sense of its surreal nature intensified. It seemed that it was impossible to write mathematics that described the real world in …

Pattern Recognition and Machine Learning

Abstract: Probability Distributions.- Linear Models for Regression.- Linear Models for Classification.- Neural Networks.- Kernel Methods.- Sparse Kernel Machines.- Graphical Models.- Mixture Models and EM.- Approximate Inference.- Sampling Methods.- Continuous Latent Variables.- Sequential Data.- Combining Models.

The Ensemble Kalman Filter: Theoretical formulation and practical implementation

Abstract: The purpose of this paper is to provide a comprehensive presentation and interpretation of the Ensemble Kalman Filter (EnKF) and its numerical implementation. The EnKF has a large user group, and numerous publications have discussed applications and theoretical aspects of it. This paper reviews the important results from these studies and also presents new ideas and alternative interpretations which further explain the success of the EnKF. In addition to providing the theoretical framework needed for using the EnKF, there is also a focus on the algorithmic formulation and optimal numerical implementation. A program listing is given for some of the key subroutines. The paper also touches upon specific issues such as the use of nonlinear measurements, in situ profiles of temperature and salinity, and data which are available with high frequency in time. An ensemble based optimal interpolation (EnOI) scheme is presented as a cost-effective approach which may serve as an alternative to the EnKF in some applications. A fairly extensive discussion is devoted to the use of time correlated model errors and the estimation of model bias.