R
Rob Knight
Researcher at University of California, San Diego
Publications - 1188
Citations - 322479
Rob Knight is an academic researcher from University of California, San Diego. The author has contributed to research in topics: Microbiome & Biology. The author has an hindex of 201, co-authored 1061 publications receiving 253207 citations. Previous affiliations of Rob Knight include Anschutz Medical Campus & University of Sydney.
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Journal ArticleDOI
Spatial variability in airborne bacterial communities across land-use types and their relationship to the bacterial communities of potential source environments.
TL;DR: Testing the near-surface atmosphere above three distinct land-use types across northern Colorado, USA found that atmospheric bacterial communities differ from those in potential source environments (leaf surfaces and soils), and it is demonstrated that this information may be able to be used to determine the relative inputs of bacteria from these source environments to the atmosphere.
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Large-scale replicated field study of maize rhizosphere identifies heritable microbes
William A. Walters,Zhao Jin,Nicholas D. Youngblut,Jason G. Wallace,Jessica L. Sutter,Wei Zhang,Antonio González-Peña,Jason A. Peiffer,Omry Koren,Omry Koren,Qiaojuan Shi,Rob Knight,Rob Knight,Tijana Glavina del Rio,Susannah G. Tringe,Edward S. Buckler,Edward S. Buckler,Jeffery L. Dangl,Ruth E. Ley,Ruth E. Ley +19 more
TL;DR: Plant genetic effects were significant amid the large effects of plant age on the rhizosphere microbiome, regardless of the specific community of each field, and despite microbiome responses to climate events.
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Meta-analyses of studies of the human microbiota
Catherine A. Lozupone,Jesse Stombaugh,Antonio Gonzalez,Gail Ackermann,Doug Wendel,Yoshiki Vázquez-Baeza,Janet K. Jansson,Jeffrey I. Gordon,Rob Knight,Rob Knight +9 more
TL;DR: The results show that cross-study comparisons of human microbiota are valuable when the studied parameter has a large effect size, but studies of more subtle effects on the human microbiota require carefully selected control populations and standardized protocols.
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Effect of storage conditions on the assessment of bacterial community structure in soil and human-associated samples
TL;DR: The results suggest that many samples collected and stored under field conditions without refrigeration may be useful for microbial community analyses, and environmental factors and biases in molecular techniques likely confer greater amounts of variation to microbial communities than do differences in short-term storage conditions.
Journal ArticleDOI
Microbial community assembly and metabolic function during mammalian corpse decomposition
Jessica L. Metcalf,Jessica L. Metcalf,Zhenjiang Zech Xu,Sophie Weiss,Simon Lax,Will Van Treuren,Embriette R. Hyde,Se Jin Song,Se Jin Song,Amnon Amir,Peter E. Larsen,Peter E. Larsen,Naseer Sangwan,Naseer Sangwan,Daniel Haarmann,Greg Humphrey,Gail Ackermann,Luke R. Thompson,Christian L. Lauber,Alexander Bibat,Catherine Nicholas,Matthew J. Gebert,Joseph F. Petrosino,Sasha C. Reed,Jack A. Gilbert,Aaron M. Lynne,Sibyl R. Bucheli,David O. Carter,Rob Knight +28 more
TL;DR: A suite of bacterial and fungal groups that contribute to nitrogen cycling and a reproducible network of decomposers that emerge on predictable time scales are found.