Shihui Ying

Bio: Shihui Ying is an academic researcher from Shanghai University. The author has contributed to research in topics: Computer science & Iterative closest point. The author has an hindex of 17, co-authored 64 publications receiving 1232 citations. Previous affiliations of Shihui Ying include University of North Carolina at Chapel Hill & Xi'an Jiaotong University.

Deep Hypergraph Structure Learning

Abstract: Learning on high-order correlation has shown superiority in data representation learning, where hypergraph has been widely used in recent decades. The performance of hypergraph-based representation learning methods, such as hypergraph neural networks, highly depends on the quality of the hypergraph structure. How to generate the hypergraph structure among data is still a challenging task. Missing and noisy data may lead to"bad connections"in the hypergraph structure and destroy the hypergraph-based representation learning process. Therefore, revealing the high-order structure, i.e., the hypergraph behind the observed data, becomes an urgent but important task. To address this issue, we design a general paradigm of deep hypergraph structure learning, namely DeepHGSL, to optimize the hypergraph structure for hypergraph-based representation learning. Concretely, inspired by the information bottleneck principle for the robustness issue, we first extend it to the hypergraph case, named by the hypergraph information bottleneck (HIB) principle. Then, we apply this principle to guide the hypergraph structure learning, where the HIB is introduced to construct the loss function to minimize the noisy information in the hypergraph structure. The hypergraph structure can be optimized and this process can be regarded as enhancing the correct connections and weakening the wrong connections in the training phase. Therefore, the proposed method benefits to extract more robust representations even on a heavily noisy structure. Finally, we evaluate the model on four benchmark datasets for representation learning. The experimental results on both graph- and hypergraph-structured data demonstrate the effectiveness and robustness of our method compared with other state-of-the-art methods.

A Self-Supervised Learning Based Channel Attention MLP-Mixer Network for Motor Imagery Decoding

Abstract: Convolutional Neural Network (CNN) is commonly used for the Electroencephalogram (EEG) based motor-imagery (MI) decoding. However, its performance is generally limited due to the small size sample problem. An alternative way to address such issue is to segment EEG trials into small slices for data augmentation, but this approach usually inevitably loses the valuable long-range dependencies of temporal information in EEG signals. To this end, we propose a novel self-supervised learning (SSL) based channel attention MLP-Mixer network (S-CAMLP-Net) for MI decoding with EEG. Specifically, a new EEG slice prediction task is designed as the pretext task to capture the long-range information of EEG trials in the time domain. In the downstream task, a newly proposed MLP-Mixer is applied to the classification task for signals rather than for images. Moreover, in order to effectively learn the discriminative spatial representations in EEG slices, an attention mechanism is integrated into MLP-Mixer to adaptively estimate the importance of each EEG channel without any prior information. Thus, the proposed S-CAMLP-Net can effectively learn more long-range temporal information and global spatial features of EEG signals. Extensive experiments are conducted on the public MI-2 dataset and the BCI Competition IV Dataset 2A. The experimental results indicate that our proposed S-CAMLP-Net achieves superior classification performance over all the compared algorithms.

A New Approach to Weighted Graph Matching

Abstract: SUMMARY Weighted graph matching is computationally challenging due to the combinatorial nature of the set of permutations. In this paper, a new relaxation approach to weighted graph matching is proposed, by which a new matching algorithm, named alternate iteration algorithm, is designed. It is proved that the algorithm proposed is locally convergent. Experiments are presented to show the effectiveness of the proposed algorithm. eration algorithm.

Learning without Forgetting

Abstract: When building a unified vision system or gradually adding new capabilities to a system, the usual assumption is that training data for all tasks is always available. However, as the number of tasks grows, storing and retraining on such data becomes infeasible. A new problem arises where we add new capabilities to a Convolutional Neural Network (CNN), but the training data for its existing capabilities are unavailable. We propose our Learning without Forgetting method, which uses only new task data to train the network while preserving the original capabilities. Our method performs favorably compared to commonly used feature extraction and fine-tuning adaption techniques and performs similarly to multitask learning that uses original task data we assume unavailable. A more surprising observation is that Learning without Forgetting may be able to replace fine-tuning with similar old and new task datasets for improved new task performance.

An overview of deep learning in medical imaging focusing on MRI

Abstract: What has happened in machine learning lately, and what does it mean for the future of medical image analysis? Machine learning has witnessed a tremendous amount of attention over the last few years. The current boom started around 2009 when so-called deep artificial neural networks began outperforming other established models on a number of important benchmarks. Deep neural networks are now the state-of-the-art machine learning models across a variety of areas, from image analysis to natural language processing, and widely deployed in academia and industry. These developments have a huge potential for medical imaging technology, medical data analysis, medical diagnostics and healthcare in general, slowly being realized. We provide a short overview of recent advances and some associated challenges in machine learning applied to medical image processing and image analysis. As this has become a very broad and fast expanding field we will not survey the entire landscape of applications, but put particular focus on deep learning in MRI. Our aim is threefold: (i) give a brief introduction to deep learning with pointers to core references; (ii) indicate how deep learning has been applied to the entire MRI processing chain, from acquisition to image retrieval, from segmentation to disease prediction; (iii) provide a starting point for people interested in experimenting and perhaps contributing to the field of machine learning for medical imaging by pointing out good educational resources, state-of-the-art open-source code, and interesting sources of data and problems related medical imaging.

Applications of Deep Learning and Reinforcement Learning to Biological Data

Abstract: Rapid advances in hardware-based technologies during the past decades have opened up new possibilities for life scientists to gather multimodal data in various application domains, such as omics , bioimaging , medical imaging , and (brain/body)–machine interfaces . These have generated novel opportunities for development of dedicated data-intensive machine learning techniques. In particular, recent research in deep learning (DL), reinforcement learning (RL), and their combination (deep RL) promise to revolutionize the future of artificial intelligence. The growth in computational power accompanied by faster and increased data storage, and declining computing costs have already allowed scientists in various fields to apply these techniques on data sets that were previously intractable owing to their size and complexity. This paper provides a comprehensive survey on the application of DL, RL, and deep RL techniques in mining biological data. In addition, we compare the performances of DL techniques when applied to different data sets across various application domains. Finally, we outline open issues in this challenging research area and discuss future development perspectives.

An overview of deep learning in medical imaging focusing on MRI

Abstract: What has happened in machine learning lately, and what does it mean for the future of medical image analysis? Machine learning has witnessed a tremendous amount of attention over the last few years. The current boom started around 2009 when so-called deep artificial neural networks began outperforming other established models on a number of important benchmarks. Deep neural networks are now the state-of-the-art machine learning models across a variety of areas, from image analysis to natural language processing, and widely deployed in academia and industry. These developments have a huge potential for medical imaging technology, medical data analysis, medical diagnostics and healthcare in general, slowly being realized. We provide a short overview of recent advances and some associated challenges in machine learning applied to medical image processing and image analysis. As this has become a very broad and fast expanding field we will not survey the entire landscape of applications, but put particular focus on deep learning in MRI. Our aim is threefold: (i) give a brief introduction to deep learning with pointers to core references; (ii) indicate how deep learning has been applied to the entire MRI processing chain, from acquisition to image retrieval, from segmentation to disease prediction; (iii) provide a starting point for people interested in experimenting and perhaps contributing to the field of deep learning for medical imaging by pointing out good educational resources, state-of-the-art open-source code, and interesting sources of data and problems related medical imaging.