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Shinya Kurata
Researcher at National Institute of Advanced Industrial Science and Technology
Publications - 46
Citations - 1215
Shinya Kurata is an academic researcher from National Institute of Advanced Industrial Science and Technology. The author has contributed to research in topics: Nucleic acid & Hybridization probe. The author has an hindex of 15, co-authored 46 publications receiving 1167 citations. Previous affiliations of Shinya Kurata include Tokyo Institute of Technology.
Papers
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Journal ArticleDOI
Fluorescence-quenching phenomenon by photoinduced electron transfer between a fluorescent dye and a nucleotide base.
Masaki Torimura,Shinya Kurata,Kazutaka Yamada,Toyokazu Yokomaku,Yoichi Kamagata,Takahiro Kanagawa,Ryuichiro Kurane +6 more
TL;DR: This work focused on the redox properties of some commercially available fluorescent dyes, and investigated dye-nucleotide interactions between a free dye and a nucleotide in aqueous solution by electrochemical and spectroscopic techniques to estimate the fluorescence quenching intensity.
Journal ArticleDOI
Fluorescent quenching-based quantitative detection of specific DNA/RNA using a BODIPY® FL-labeled probe or primer
Shinya Kurata,Takahiro Kanagawa,Kazutaka Yamada,Masaki Torimura,Toyokazu Yokomaku,Yoichi Kamagata,Ryuichiro Kurane +6 more
TL;DR: A simple method for the quantitative detection of specific DNA or RNA molecules based on the finding that BODIPY((R)) FL fluorescence was quenched by its interaction with a uniquely positioned guanine.
Journal ArticleDOI
Reevaluation and reduction of a PCR bias caused by reannealing of templates.
Shinya Kurata,Shinya Kurata,Takahiro Kanagawa,Takahiro Kanagawa,Yukio Magariyama,Kyoko Takatsu,Kazutaka Yamada,Toyokazu Yokomaku,Yoichi Kamagata +8 more
TL;DR: The bias toward a 1:1 ratio of products in multitemplate PCR used in ecological studies was reevaluated and it was shown that the template reannealing at the annealing step would not cause the bias; however, the preferential homoduplex formation during temperature decrease from denaturation to annealed step wouldcause the bias.
Journal ArticleDOI
Technique for quantitative detection of specific DNA sequences using alternately binding quenching probe competitive assay combined with loop-mediated isothermal amplification.
Hidenori Tani,Tatsuya Teramura,Ken Adachi,Satoshi Tsuneda,Shinya Kurata,Kazunori Nakamura,Kazunori Nakamura,Takahiro Kanagawa,Naohiro Noda +8 more
TL;DR: ABC-LAMP enables the accurate quantification of DNA in the presence of DNA amplification inhibitors such as humic acid, urea, and Triton X-100 that compromise the values measured by real-time PCR and real- time turbidimetry of LAMP.
Patent
Method for assaying nucleic acid, nucleic acid probe therefor, and method for analyzing data obtained by the method
Ryuichiro Kurane,隆一郎 倉根,Kanekawa Takahiro,貴博 金川,Yoichi Kamagata,洋一 鎌形,Masamoto Torimura,政基 鳥村,Shinya Kurata,信也 蔵田,Kazutaka Yamada,一隆 山田,Yokomaku Toyoichi,豊一 横幕 +13 more
TL;DR: In this article, a method for assaying a nucleic acid comprising the steps of hybridizing the probe consisting of a fluorochrome, 2-O-methyl-oligonucleotide, chimeric oligonucleotide mediated by them to a target n-acid, and so on or assaying the decrease in the fluorescence of the fluoroxide before and after the hybridization, the real-time quantitative PCR method using the method, and a method of analyzing data having a process in which a fluorescence intensity value in the annealing reaction is corrected by that